view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
OSGIN1_chr16_83948240_83971332 | 83950850 | T | TACTGGCA others(355): Show |
upstream_gene_variant | MODIFIER | HG01167.hp2 HG01175.hp2 HG01346.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0100 a0001c0001t0001g0104 a0001c0001t0006g0001 |
3 | 350 | 0.0086 | 362 | c.-25 others(373): Show |
OSGIN1 | ENSG00000140961.14 | transcript | ENST00000393306.6 | protein_coding | 2389 | chr16 | TogoVar | |||||||
PCBP3_chr21_45638725_45947450 | 45746666 | C | CACACGGT others(355): Show |
intron_variant | MODIFIER | NA18940.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0288 | 1 | 292 | 0.0034 | 362 | c.-16 others(381): Show |
PCBP3 | ENSG00000183570.17 | transcript | ENST00000681687.1 | protein_coding | 3/17 | chr21 | TogoVar | |||||||
PCBP3_chr21_45638725_45947450 | 45746666 | C | CACACGGT others(355): Show |
intron_variant | MODIFIER | HG01192.hp2 HG01516.hp1 HG01517.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0200 others(1): Show |
4 | 292 | 0.0137 | 362 | c.-16 others(381): Show |
PCBP3 | ENSG00000183570.17 | transcript | ENST00000681687.1 | protein_coding | 3/17 | chr21 | TogoVar | |||||||
PCBP3_chr21_45638725_45947450 | 45746666 | C | CACACGGT others(355): Show |
intron_variant | MODIFIER | HG00639.hp1 HG01358.hp2 HG01981.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0139 a0001c0001t0001g0153 a0001c0001t0001g0198 others(2): Show |
5 | 292 | 0.0171 | 362 | c.-16 others(381): Show |
PCBP3 | ENSG00000183570.17 | transcript | ENST00000681687.1 | protein_coding | 3/17 | chr21 | TogoVar | |||||||
PCBP3_chr21_45638725_45947450 | 45746666 | C | CACACGGT others(355): Show |
intron_variant | MODIFIER | HG00323.hp1 HG00735.hp2 HG01099.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0008 | a0001c0001t0004g0114 a0001c0001t0004g0116 a0001c0001t0004g0117 others(1): Show |
4 | 292 | 0.0137 | 362 | c.-16 others(381): Show |
PCBP3 | ENSG00000183570.17 | transcript | ENST00000681687.1 | protein_coding | 3/17 | chr21 | TogoVar | |||||||
PCBP3_chr21_45638725_45947450 | 45909792 | C | CCCCCCCA others(355): Show |
intron_variant | MODIFIER | HG01934.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0151 | 1 | 292 | 0.0034 | 362 | c.471 others(377): Show |
PCBP3 | ENSG00000183570.17 | transcript | ENST00000681687.1 | protein_coding | 10/17 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
PCBP3_chr21_45638725_45947450 | 45927331 | T | TCCTCCCC others(355): Show |
intron_variant | MODIFIER | NA19087.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0173 | 1 | 292 | 0.0034 | 362 | c.718 others(379): Show |
PCBP3 | ENSG00000183570.17 | transcript | ENST00000681687.1 | protein_coding | 13/17 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
PIGQ_chr16_564968_589109 | 571109 | C | CTGGCTAG others(355): Show |
intron_variant | MODIFIER | HG03834.hp1 | a0003 | a0003c0003 | a0003c0003t0003 | a0003c0003t0003g0048 | 1 | 408 | 0.0025 | 362 | c.-10 others(379): Show |
PIGQ | ENSG00000007541.17 | transcript | ENST00000321878.10 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
PIMREG_chr17_6439455_6456469 | 6455708 | G | GGGGGAGG others(355): Show |
downstream_gene_variant | MODIFIER | HG01433.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0015 | 1 | 312 | 0.0032 | 362 | c.*53 others(373): Show |
PIMREG | ENSG00000129195.16 | transcript | ENST00000572447.6 | protein_coding | 4240 | chr17 | TogoVar | |||||||
PITPNC1_chr17_67372281_67702256 | 67550441 | G | GAAAAGAC others(355): Show |
intron_variant | MODIFIER | HG00741.hp1 | a0001 | a0001c0001 | a0001c0001t0026 | a0001c0001t0026g0203 | 1 | 218 | 0.0046 | 362 | c.198 others(379): Show |
PITPNC1 | ENSG00000154217.16 | transcript | ENST00000581322.6 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
PKP3_chr11_389209_409908 | 401882 | C | CGCTCACC others(355): Show |
intron_variant | MODIFIER | HG02074.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0143 | 1 | 216 | 0.0046 | 362 | c.173 others(381): Show |
PKP3 | ENSG00000184363.10 | transcript | ENST00000331563.7 | protein_coding | 8/12 | chr11 | TogoVar | |||||||
PLA2R1_chr2_159927006_160067615 | 159941367 | T | TCTTTCTG others(355): Show |
3_prime_UTR_variant | MODIFIER | NA18997.hp1 | a0001 | a0001c0001 | a0001c0001t0135 | a0001c0001t0135g0304 | 1 | 326 | 0.0031 | 362 | c.*41 others(371): Show |
PLA2R1 | ENSG00000153246.13 | transcript | ENST00000283243.13 | protein_coding | 30/30 | 410 | chr2 | TogoVar | ||||||
PLCB1_chr20_8127266_8889900 | 8661993 | T | TAATTATT others(355): Show |
intron_variant | MODIFIER | NA20300.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0025 | 1 | 106 | 0.0094 | 362 | c.862 others(379): Show |
PLCB1 | ENSG00000182621.19 | transcript | ENST00000338037.11 | protein_coding | 9/31 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
PLEKHG4B_chr5_87168_194966 | 105137 | T | TTGGTGTT others(355): Show |
intron_variant | MODIFIER | HG03486.hp1 | a0033 | a0033c0081 | a0033c0081t0064 | a0033c0081t0064g0200 | 1 | 210 | 0.0048 | 362 | c.46- others(377): Show |
PLEKHG4B | ENSG00000153404.15 | transcript | ENST00000637938.2 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
PLEKHG4B_chr5_87168_194966 | 105137 | T | TTGGTGTT others(355): Show |
intron_variant | MODIFIER | HG02818.hp1 | a0029 | a0029c0046 | a0029c0046t0047 | a0029c0046t0047g0180 | 1 | 210 | 0.0048 | 362 | c.46- others(377): Show |
PLEKHG4B | ENSG00000153404.15 | transcript | ENST00000637938.2 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
PLEKHG4B_chr5_87168_194966 | 105137 | T | TTGGTGTT others(355): Show |
intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00597.hp2 others(36): Show |
a0001a0006a0008others(15): Show | a0001c0011a0006c0021a0006c0068others(27): Show | a0001c0011t0048a0006c0021t0018a0006c0021t0056others(34): Show | a0001c0011t0048g0179 a0006c0021t0018g0198 a0006c0021t0056g0199 others(36): Show |
39 | 210 | 0.1857 | 362 | c.46- others(377): Show |
PLEKHG4B | ENSG00000153404.15 | transcript | ENST00000637938.2 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
PLEKHG4B_chr5_87168_194966 | 164952 | A | ACAGTAAT others(355): Show |
intron_variant | MODIFIER | HG02109.hp2 | a0008 | a0008c0024 | a0008c0024t0021 | a0008c0024t0021g0175 | 1 | 210 | 0.0048 | 362 | c.347 others(381): Show |
PLEKHG4B | ENSG00000153404.15 | transcript | ENST00000637938.2 | protein_coding | 13/19 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
PLEKHG4B_chr5_87168_194966 | 165509 | G | GGCTCACA others(355): Show |
intron_variant | MODIFIER | NA18979.hp2 NA19066.hp2 NA19088.hp1 |
a0003 | a0003c0004a0003c0017 | a0003c0004t0016a0003c0017t0016 | a0003c0004t0016g0078 a0003c0004t0016g0133 a0003c0017t0016g0110 |
3 | 210 | 0.0143 | 362 | c.347 others(381): Show |
PLEKHG4B | ENSG00000153404.15 | transcript | ENST00000637938.2 | protein_coding | 13/19 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
PLPP1_chr5_55419854_55539964 | 55433460 | T | TTCAGTAA others(355): Show |
intron_variant | MODIFIER | HG01258.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0158 | 1 | 294 | 0.0034 | 362 | c.550 others(379): Show |
PLPP1 | ENSG00000067113.17 | transcript | ENST00000307259.9 | protein_coding | 4/5 | chr5 | TogoVar | |||||||
PLPP2_chr19_276043_296403 | 291612 | G | GGGGGGGA others(355): Show |
upstream_gene_variant | MODIFIER | HG01069.hp1 HG01071.hp1 HG01106.hp1 others(11): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0001 | a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0054 others(9): Show |
14 | 354 | 0.0396 | 362 | c.-27 others(371): Show |
PLPP2 | ENSG00000141934.10 | transcript | ENST00000434325.7 | protein_coding | 210 | chr19 | TogoVar | |||||||
PNMA5_chrX_152983824_152999116 | 152998738 | T | TTTATATA others(355): Show |
upstream_gene_variant | MODIFIER | NA18990.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 286 | 0.0035 | 362 | c.-50 others(373): Show |
PNMA5 | ENSG00000198883.12 | transcript | ENST00000535214.6 | protein_coding | 4623 | chrX | TogoVar | |||||||
PRKAG2_chr7_151551127_151882115 | 151855031 | G | GCTCCACA others(355): Show |
intron_variant | MODIFIER | HG03209.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0039 | 1 | 252 | 0.0040 | 362 | c.114 others(381): Show |
PRKAG2 | ENSG00000106617.16 | transcript | ENST00000287878.9 | protein_coding | 1/15 | chr7 | TogoVar | |||||||
PRSS33_chr16_2778953_2792560 | 2787264 | C | CTCACCCC others(355): Show |
intron_variant | MODIFIER | NA19068.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0075 | 1 | 386 | 0.0026 | 362 | c.-58 others(377): Show |
PRSS33 | ENSG00000103355.14 | transcript | ENST00000682474.1 | protein_coding | 1/6 | chr16 | TogoVar | |||||||
RIMBP2_chr12_130391133_130721299 | 130392443 | G | GTCAGTTA others(355): Show |
downstream_gene_variant | MODIFIER | HG02258.hp1 HG02615.hp1 HG02622.hp1 others(5): Show |
a0001a0002a0015 | a0001c0005a0001c0020a0001c0043others(4): Show | a0001c0005t0001a0001c0020t0001a0001c0043t0001others(4): Show | a0001c0005t0001g0129 a0001c0020t0001g0118 a0001c0020t0001g0140 others(5): Show |
8 | 180 | 0.0444 | 362 | c.*49 others(373): Show |
RIMBP2 | ENSG00000060709.17 | transcript | ENST00000690449.1 | protein_coding | 3689 | chr12 | TogoVar | |||||||
RNF17_chr13_24759169_24884921 | 24881918 | C | CTATATAG others(355): Show |
downstream_gene_variant | MODIFIER | NA19012.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0216 | 1 | 426 | 0.0024 | 362 | c.*21 others(373): Show |
RNF17 | ENSG00000132972.19 | transcript | ENST00000255324.10 | protein_coding | 1998 | chr13 | TogoVar | |||||||
RNF220_chr1_44400255_44656723 | 44419901 | T | TAGAAACC others(355): Show |
intron_variant | MODIFIER | HG00544.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0208 | 1 | 218 | 0.0046 | 362 | c.625 others(379): Show |
RNF220 | ENSG00000187147.19 | transcript | ENST00000361799.7 | protein_coding | 2/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
RSRC1_chr3_158105089_158550730 | 158228874 | A | AACACACA others(355): Show |
intron_variant | MODIFIER | HG02257.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0095 | 1 | 276 | 0.0036 | 362 | c.494 others(381): Show |
RSRC1 | ENSG00000174891.14 | transcript | ENST00000611884.5 | protein_coding | 4/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SATL1_chrX_85087284_85248779 | 85088071 | C | CGTATTTA others(355): Show |
downstream_gene_variant | MODIFIER | HG02145.hp1 | a0005 | a0005c0005 | a0005c0005t0002 | a0005c0005t0002g0045 | 1 | 232 | 0.0043 | 362 | c.*43 others(373): Show |
SATL1 | ENSG00000184788.14 | transcript | ENST00000644105.2 | protein_coding | 4212 | chrX | TogoVar | |||||||
SCTR_chr2_119434843_119529483 | 119525206 | T | TGGGCTCA others(355): Show |
upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(103): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0016others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(13): Show | a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0120 others(102): Show |
106 | 290 | 0.3655 | 362 | c.-98 others(371): Show |
SCTR | ENSG00000080293.10 | transcript | ENST00000019103.8 | protein_coding | 724 | chr2 | TogoVar | |||||||
SCTR_chr2_119434843_119529483 | 119525231 | G | AGCCTCCC others(355): Show |
upstream_gene_variant | MODIFIER | HG01168.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0263 | 1 | 290 | 0.0035 | 362 | c.-10 others(373): Show |
SCTR | ENSG00000080293.10 | transcript | ENST00000019103.8 | protein_coding | 748 | chr2 | TogoVar | |||||||
SCTR_chr2_119434843_119529483 | 119525231 | G | AGCCTCCC others(355): Show |
upstream_gene_variant | MODIFIER | HG01891.hp2 HG02129.hp2 HG02280.hp1 others(17): Show |
a0001a0010 | a0001c0001a0001c0002a0010c0010 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(3): Show | a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0143 others(17): Show |
20 | 290 | 0.0690 | 362 | c.-10 others(373): Show |
SCTR | ENSG00000080293.10 | transcript | ENST00000019103.8 | protein_coding | 748 | chr2 | TogoVar | |||||||
SEL1L2_chr20_13844247_13995614 | 13934476 | C | CATATATA others(355): Show |
intron_variant | MODIFIER | HG03471.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0133 | 1 | 324 | 0.0031 | 362 | c.115 others(379): Show |
SEL1L2 | ENSG00000101251.13 | transcript | ENST00000284951.10 | protein_coding | 2/19 | chr20 | TogoVar | |||||||
SEL1L2_chr20_13844247_13995614 | 13934476 | C | CATATATA others(355): Show |
intron_variant | MODIFIER | NA18998.hp1 NA19001.hp2 NA19079.hp2 |
a0004 | a0004c0006 | a0004c0006t0001 | a0004c0006t0001g0085 a0004c0006t0001g0088 a0004c0006t0001g0089 |
3 | 324 | 0.0093 | 362 | c.115 others(379): Show |
SEL1L2 | ENSG00000101251.13 | transcript | ENST00000284951.10 | protein_coding | 2/19 | chr20 | TogoVar | |||||||
SEL1L2_chr20_13844247_13995614 | 13934476 | C | CATATATA others(355): Show |
intron_variant | MODIFIER | HG03831.hp2 HG03834.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0102 a0001c0001t0001g0112 |
2 | 324 | 0.0062 | 362 | c.115 others(379): Show |
SEL1L2 | ENSG00000101251.13 | transcript | ENST00000284951.10 | protein_coding | 2/19 | chr20 | TogoVar | |||||||
SEMA3A_chr7_83950777_84199789 | 84086468 | T | TATATTAT others(355): Show |
intron_variant | MODIFIER | HG02280.hp1 HG02809.hp2 NA19043.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0004a0001c0003t0008 | a0001c0001t0004g0214 a0001c0001t0004g0223 a0001c0003t0008g0076 |
3 | 276 | 0.0109 | 362 | c.453 others(381): Show |
SEMA3A | ENSG00000075213.11 | transcript | ENST00000265362.9 | protein_coding | 4/16 | chr7 | TogoVar | |||||||
SHISA5_chr3_48462876_48509174 | 48486239 | C | CATATATT others(355): Show |
intron_variant | MODIFIER | HG02258.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0060 | 1 | 290 | 0.0035 | 362 | c.234 others(379): Show |
SHISA5 | ENSG00000164054.17 | transcript | ENST00000296444.7 | protein_coding | 2/5 | chr3 | TogoVar | |||||||
SIGIRR_chr11_400716_419999 | 401882 | C | CGCTCACC others(355): Show |
downstream_gene_variant | MODIFIER | HG00438.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0071 | 1 | 242 | 0.0041 | 362 | c.*40 others(373): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3833 | chr11 | TogoVar | |||||||
SIGIRR_chr11_400716_419999 | 412377 | C | CCAGCTCT others(355): Show |
intron_variant | MODIFIER | HG02622.hp2 | a0004 | a0004c0007 | a0004c0007t0001 | a0004c0007t0001g0121 | 1 | 242 | 0.0041 | 362 | c.-15 others(381): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 1/9 | chr11 | TogoVar | |||||||
SLAIN1_chr13_77692687_77769229 | 77704211 | T | TATGTTTT others(355): Show |
intron_variant | MODIFIER | HG02015.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0178 | 1 | 300 | 0.0033 | 362 | c.626 others(379): Show |
SLAIN1 | ENSG00000139737.23 | transcript | ENST00000418532.6 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
SLC12A7_chr5_1045384_1117063 | 1073173 | G | GAGCCCCC others(355): Show |
intron_variant | MODIFIER | NA20129.hp1 | a0001 | a0001c0010 | a0001c0010t0005 | a0001c0010t0005g0024 | 1 | 118 | 0.0085 | 362 | c.224 others(379): Show |
SLC12A7 | ENSG00000113504.21 | transcript | ENST00000264930.10 | protein_coding | 17/23 | chr5 | TogoVar | |||||||
SLC17A5_chr6_73588379_73658992 | 73632008 | T | TAAGAATG others(355): Show |
intron_variant | MODIFIER | HG00099.hp1 HG01167.hp2 HG01175.hp2 others(5): Show |
a0001a0003 | a0001c0001a0003c0008 | a0001c0001t0004a0003c0008t0004 | a0001c0001t0004g0003 a0001c0001t0004g0037 a0001c0001t0004g0042 others(4): Show |
8 | 324 | 0.0247 | 362 | c.819 others(379): Show |
SLC17A5 | ENSG00000119899.13 | transcript | ENST00000355773.6 | protein_coding | 6/10 | chr6 | TogoVar | |||||||
SLC25A18_chr22_17558498_17595995 | 17567654 | C | CTATCCTT others(355): Show |
intron_variant | MODIFIER | HG00597.hp2 HG02080.hp2 HG02132.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0006 | a0001c0001t0001g0331 a0001c0001t0001g0332 a0001c0001t0001g0333 others(5): Show |
8 | 410 | 0.0195 | 362 | c.-26 others(381): Show |
SLC25A18 | ENSG00000182902.14 | transcript | ENST00000327451.11 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SLCO3A1_chr15_91848708_92170903 | 92143422 | A | ATTATATA others(355): Show |
intron_variant | MODIFIER | HG02895.hp2 HG02897.hp2 |
a0001 | a0001c0002 | a0001c0002t0014 | a0001c0002t0014g0162 a0001c0002t0014g0164 |
2 | 190 | 0.0105 | 362 | c.151 others(381): Show |
SLCO3A1 | ENSG00000176463.14 | transcript | ENST00000318445.11 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SLCO3A1_chr15_91848708_92170903 | 92143422 | A | ATTATATA others(355): Show |
intron_variant | MODIFIER | NA19030.hp1 | a0001 | a0001c0001 | a0001c0001t0039 | a0001c0001t0039g0013 | 1 | 190 | 0.0053 | 362 | c.151 others(381): Show |
SLCO3A1 | ENSG00000176463.14 | transcript | ENST00000318445.11 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12322942 | G | GGTCACTG others(355): Show |
intron_variant | MODIFIER | HG00140.hp2 HG00323.hp1 HG00438.hp1 others(39): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0031others(30): Show | a0001c0001t0001g0112 a0001c0001t0001g0163 a0001c0001t0004g0078 others(39): Show |
42 | 176 | 0.2386 | 362 | c.178 others(383): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12322942 | G | GGTCACTG others(355): Show |
intron_variant | MODIFIER | HG02886.hp1 | a0001 | a0001c0001 | a0001c0001t0017 | a0001c0001t0017g0101 | 1 | 176 | 0.0057 | 362 | c.178 others(383): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 15/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX9_chr6_157818246_157950077 | 157827087 | A | AACATATA others(355): Show |
intron_variant | MODIFIER | HG03669.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0091 | 1 | 302 | 0.0033 | 362 | c.12+ others(377): Show |
SNX9 | ENSG00000130340.17 | transcript | ENST00000392185.8 | protein_coding | 1/17 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SPOCD1_chr1_31785422_31821022 | 31807412 | A | AGGGGAGG others(355): Show |
intron_variant | MODIFIER | HG03669.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0202 | 1 | 260 | 0.0039 | 362 | c.138 others(381): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 2/15 | chr1 | TogoVar | |||||||
ST6GALNAC6_chr9_127880321_127904603 | 127882566 | G | GGAAAGGA others(355): Show |
downstream_gene_variant | MODIFIER | HG04115.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0089 | 1 | 360 | 0.0028 | 362 | c.*40 others(373): Show |
ST6GALNAC6 | ENSG00000160408.16 | transcript | ENST00000373146.6 | protein_coding | 2754 | chr9 | TogoVar | |||||||
ST7_chr7_116948501_117235176 | 117031379 | T | TGTATATA others(355): Show |
intron_variant | MODIFIER | HG02027.hp2 NA18982.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0082 a0001c0001t0001g0083 |
2 | 188 | 0.0106 | 362 | c.152 others(381): Show |
ST7 | ENSG00000004866.22 | transcript | ENST00000323984.8 | protein_coding | 1/15 | chr7 | TogoVar |