view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SCN10A_chr3_38691807_38821217 | 38769239 | C | CTTTTT | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00323.hp2 others(126): Show |
a0001a0002a0005others(12): Show | a0001c0003a0001c0004a0001c0005others(27): Show | a0001c0003t0001a0001c0003t0002a0001c0004t0001others(30): Show | a0001c0003t0001g0014 a0001c0003t0001g0016 a0001c0003t0001g0023 others(126): Show |
129 | 372 | 0.3468 | 5 | c.599 others(22): Show |
SCN10A | ENSG00000185313.9 | transcript | ENST00000449082.3 | protein_coding | 5/27 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38849257 | C | CTTTTT | intron_variant | MODIFIER | HG01243.hp2 HG01516.hp2 HG01517.hp2 others(3): Show |
a0001a0008 | a0001c0005a0001c0006a0001c0011others(1): Show | a0001c0005t0001a0001c0006t0003a0001c0011t0011others(1): Show | a0001c0005t0001g0248 a0001c0005t0001g0249 a0001c0006t0003g0291 others(3): Show |
6 | 314 | 0.0191 | 5 | c.432 others(24): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 29/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38889802 | A | AAAAAT | intron_variant | MODIFIER | HG00408.hp1 HG01517.hp1 HG01891.hp2 others(35): Show |
a0001a0002a0003 | a0001c0001a0001c0006a0002c0003others(2): Show | a0001c0001t0002a0001c0006t0006a0002c0003t0001others(4): Show | a0001c0001t0002g0054 a0001c0001t0002g0062 a0001c0001t0002g0084 others(35): Show |
38 | 314 | 0.1210 | 5 | c.283 others(24): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 19/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38950059 | C | CCCCCT | intron_variant | MODIFIER | HG00639.hp2 HG01070.hp2 HG01071.hp2 others(60): Show |
a0001a0002a0003others(1): Show | a0001c0002a0001c0005a0001c0007others(3): Show | a0001c0002t0001a0001c0002t0002a0001c0005t0001others(6): Show | a0001c0002t0001g0238 a0001c0002t0001g0239 a0001c0002t0002g0204 others(60): Show |
63 | 314 | 0.2006 | 5 | c.267 others(18): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 5/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38974709 | A | AAAAAG | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00323.hp2 others(60): Show |
a0001a0006 | a0001c0002a0006c0024 | a0001c0002t0001a0001c0002t0002a0001c0002t0004others(2): Show | a0001c0002t0001g0148 a0001c0002t0001g0149 a0001c0002t0001g0150 others(60): Show |
63 | 314 | 0.2006 | 5 | c.-27 others(26): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 39041802 | T | TAAATC | intron_variant | MODIFIER | HG01934.hp2 HG02258.hp1 HG02280.hp2 others(8): Show |
a0001 | a0001c0002a0001c0009a0001c0011others(2): Show | a0001c0002t0004a0001c0002t0014a0001c0009t0007others(3): Show | a0001c0002t0004g0262 a0001c0002t0014g0199 a0001c0009t0007g0200 others(8): Show |
11 | 314 | 0.0350 | 5 | c.-40 others(24): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 1/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 39042974 | A | AAAAAG | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00323.hp2 others(98): Show |
a0001a0003a0010 | a0001c0001a0001c0002a0001c0005others(9): Show | a0001c0001t0003a0001c0001t0020a0001c0002t0001others(12): Show | a0001c0001t0003g0265 a0001c0001t0003g0266 a0001c0001t0003g0269 others(98): Show |
101 | 314 | 0.3217 | 5 | c.-40 others(24): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 1/29 | chr3 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 166067700 | C | CTTTTT | intron_variant | MODIFIER | HG00423.hp1 HG00609.hp2 HG02027.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0019a0001c0001t0038others(1): Show | a0001c0001t0002g0093 a0001c0001t0002g0102 a0001c0001t0002g0116 others(6): Show |
9 | 356 | 0.0253 | 5 | c.264 others(22): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 4/28 | chr2 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 166113567 | T | TATAAA | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(328): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0003a0001c0004others(18): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(95): Show | a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0020 others(326): Show |
331 | 356 | 0.9298 | 5 | c.-14 others(26): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 2/28 | chr2 | TogoVar | |||||||
SCN1A_chr2_165980813_166133020 | 166118298 | G | GCTTCT | intron_variant | MODIFIER | HG02145.hp2 HG02717.hp1 HG03225.hp2 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0019a0001c0001t0051a0001c0004t0055 | a0001c0001t0019g0035 a0001c0001t0051g0036 a0001c0004t0055g0136 |
3 | 356 | 0.0084 | 5 | c.-14 others(24): Show |
SCN1A | ENSG00000144285.23 | transcript | ENST00000674923.1 | protein_coding | 2/28 | chr2 | TogoVar | |||||||
SCN1B_chr19_35025470_35045449 | 35029542 | C | CAAAAA | upstream_gene_variant | MODIFIER | HG00621.hp1 HG00673.hp2 HG02015.hp1 others(10): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0023 a0001c0001t0001g0048 others(7): Show |
13 | 404 | 0.0322 | 5 | c.-12 others(16): Show |
SCN1B | ENSG00000105711.14 | transcript | ENST00000262631.11 | protein_coding | 927 | chr19 | TogoVar | |||||||
SCN2A_chr2_165234414_165397304 | 165256000 | C | CTTTTT | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00408.hp2 others(111): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(11): Show | a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 others(111): Show |
114 | 358 | 0.3184 | 5 | c.-52 others(24): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165260970 | C | CAAAAA | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00544.hp2 others(79): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0019 a0001c0001t0001g0152 a0001c0001t0001g0153 others(79): Show |
82 | 358 | 0.2291 | 5 | c.-52 others(24): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165263886 | A | ATTTTT | intron_variant | MODIFIER | HG00408.hp1 HG00673.hp2 HG01981.hp1 others(10): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0002a0001c0002t0001a0002c0003t0001 | a0001c0001t0002g0026 a0001c0001t0002g0027 a0001c0001t0002g0145 others(10): Show |
13 | 358 | 0.0363 | 5 | c.-52 others(24): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165291409 | T | TGTCTG | intron_variant | MODIFIER | HG00544.hp1 HG00733.hp1 HG01884.hp2 others(5): Show |
a0001a0002 | a0001c0002a0002c0003 | a0001c0002t0001a0002c0003t0001 | a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0001g0059 others(5): Show |
8 | 358 | 0.0224 | 5 | c.-51 others(22): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCN2A_chr2_165234414_165397304 | 165291491 | T | TTTTTC | intron_variant | MODIFIER | HG00408.hp2 HG01081.hp1 HG01257.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0002 a0001c0001t0002g0195 a0001c0001t0002g0225 |
4 | 358 | 0.0112 | 5 | c.-51 others(22): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SCN2A_chr2_165234414_165397304 | 165294040 | A | AAGATT | intron_variant | MODIFIER | HG00438.hp2 HG00621.hp1 HG00738.hp1 others(10): Show |
a0001 | a0001c0001a0001c0019 | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(2): Show | a0001c0001t0001g0020 a0001c0001t0002g0137 a0001c0001t0002g0139 others(10): Show |
13 | 358 | 0.0363 | 5 | c.-51 others(22): Show |
SCN2A | ENSG00000136531.19 | transcript | ENST00000375437.7 | protein_coding | 1/26 | chr2 | TogoVar | |||||||
SCN2B_chr11_118157806_118181639 | 118174091 | C | CTTTTG | intron_variant | MODIFIER | HG00558.hp1 HG00741.hp2 HG01243.hp1 others(24): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0010others(5): Show | a0001c0001t0001g0175 a0001c0001t0001g0180 a0001c0001t0001g0214 others(15): Show |
27 | 450 | 0.0600 | 5 | c.70+ others(20): Show |
SCN2B | ENSG00000149575.9 | transcript | ENST00000278947.6 | protein_coding | 1/3 | chr11 | TogoVar | |||||||
SCN3A_chr2_165082526_165209050 | 165086861 | C | CTTTTT | downstream_gene_variant | MODIFIER | HG00639.hp2 HG02129.hp2 HG03490.hp1 others(4): Show |
a0001a0013 | a0001c0001a0001c0003a0013c0028 | a0001c0001t0001a0001c0003t0001a0001c0003t0002others(1): Show | a0001c0001t0001g0003 a0001c0001t0001g0151 a0001c0001t0001g0153 others(3): Show |
7 | 314 | 0.0223 | 5 | c.*32 others(16): Show |
SCN3A | ENSG00000153253.20 | transcript | ENST00000283254.12 | protein_coding | 664 | chr2 | TogoVar | |||||||
SCN3B_chr11_123624188_123659624 | 123648606 | A | AACAGT | intron_variant | MODIFIER | HG00323.hp2 HG00735.hp2 HG01168.hp2 others(12): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(8): Show | a0001c0001t0001g0032 a0001c0001t0001g0343 a0001c0001t0004g0031 others(10): Show |
15 | 450 | 0.0333 | 5 | c.56- others(20): Show |
SCN3B | ENSG00000166257.10 | transcript | ENST00000299333.8 | protein_coding | 2/6 | chr11 | TogoVar | |||||||
SCN5A_chr3_38543062_38654687 | 38590221 | T | TAAAAA | intron_variant | MODIFIER | HG00609.hp1 HG01175.hp2 HG01978.hp1 others(5): Show |
a0001a0008a0011others(1): Show | a0001c0002a0001c0003a0001c0004others(3): Show | a0001c0002t0001a0001c0003t0002a0001c0004t0001others(3): Show | a0001c0002t0001g0164 a0001c0002t0001g0319 a0001c0003t0002g0297 others(5): Show |
8 | 340 | 0.0235 | 5 | c.226 others(24): Show |
SCN5A | ENSG00000183873.18 | transcript | ENST00000413689.6 | protein_coding | 14/27 | chr3 | TogoVar | |||||||
SCN8A_chr12_51586233_51817864 | 51606825 | G | GTATTT | intron_variant | MODIFIER | HG01884.hp1 HG02257.hp1 HG02257.hp2 others(17): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0006a0001c0002t0001a0001c0002t0006others(9): Show | a0001c0001t0006g0002 a0001c0001t0006g0003 a0001c0002t0001g0001 others(17): Show |
20 | 202 | 0.0990 | 5 | c.-55 others(24): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN8A_chr12_51586233_51817864 | 51639879 | C | CTTTTT | intron_variant | MODIFIER | HG02040.hp1 HG02735.hp2 NA18946.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0003a0001c0002t0001a0001c0003t0013 | a0001c0001t0003g0015 a0001c0001t0003g0133 a0001c0002t0001g0138 others(3): Show |
6 | 202 | 0.0297 | 5 | c.-54 others(24): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN8A_chr12_51586233_51817864 | 51663903 | A | ATTTTT | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG01070.hp1 others(39): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0005others(10): Show | a0001c0001t0002g0099 a0001c0001t0002g0182 a0001c0001t0003g0133 others(39): Show |
42 | 202 | 0.2079 | 5 | c.276 others(20): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN8A_chr12_51586233_51817864 | 51677056 | G | GTTTTA | intron_variant | MODIFIER | HG00621.hp2 HG00733.hp1 HG01167.hp2 others(29): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(10): Show | a0001c0001t0002g0024 a0001c0001t0003g0015 a0001c0001t0003g0025 others(29): Show |
32 | 202 | 0.1584 | 5 | c.277 others(22): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN8A_chr12_51586233_51817864 | 51703237 | T | TTTTTG | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(124): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(23): Show | a0001c0001t0002g0099 a0001c0001t0002g0182 a0001c0001t0003g0015 others(124): Show |
127 | 202 | 0.6287 | 5 | c.113 others(22): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 9/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN8A_chr12_51586233_51817864 | 51761465 | A | ATTTAT | intron_variant | MODIFIER | HG02895.hp2 HG03098.hp1 HG03130.hp2 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0004a0001c0001t0006a0001c0003t0006 | a0001c0001t0004g0162 a0001c0001t0006g0002 a0001c0001t0006g0003 others(4): Show |
7 | 202 | 0.0347 | 5 | c.237 others(24): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 14/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN8A_chr12_51586233_51817864 | 51779219 | C | CAAAAA | intron_variant | MODIFIER | HG00140.hp2 HG00639.hp1 HG01168.hp2 others(42): Show |
a0001 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0006others(10): Show | a0001c0001t0003g0015 a0001c0001t0003g0017 a0001c0001t0003g0021 others(42): Show |
45 | 202 | 0.2228 | 5 | c.382 others(24): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 20/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN8A_chr12_51586233_51817864 | 51788287 | C | CTTTTT | intron_variant | MODIFIER | HG02040.hp2 HG02602.hp1 HG02615.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0006 | a0001c0001t0003g0026 a0001c0001t0003g0038 a0001c0001t0003g0049 others(4): Show |
7 | 202 | 0.0347 | 5 | c.422 others(22): Show |
SCN8A | ENSG00000196876.19 | transcript | ENST00000354534.11 | protein_coding | 22/26 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SCN9A_chr2_166190185_166380944 | 166199975 | G | GTTTTT | intron_variant | MODIFIER | HG00558.hp2 HG02027.hp1 HG02486.hp1 others(6): Show |
a0001a0004 | a0001c0002a0001c0003a0001c0006others(2): Show | a0001c0002t0010a0001c0003t0001a0001c0003t0006others(5): Show | a0001c0002t0010g0007 a0001c0003t0001g0216 a0001c0003t0006g0078 others(6): Show |
9 | 296 | 0.0304 | 5 | c.477 others(22): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 26/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166266840 | C | CTTGAT | intron_variant | MODIFIER | HG01496.hp1 HG02922.hp1 HG03225.hp2 others(1): Show |
a0001a0011 | a0001c0003a0001c0005a0001c0007others(1): Show | a0001c0003t0012a0001c0005t0012a0001c0007t0012others(1): Show | a0001c0003t0012g0261 a0001c0005t0012g0022 a0001c0007t0012g0018 others(1): Show |
4 | 296 | 0.0135 | 5 | c.335 others(24): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 17/26 | chr2 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166310653 | G | GGGACT | intron_variant | MODIFIER | NA18963.hp1 NA18971.hp2 NA19081.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0002g0064 |
3 | 296 | 0.0101 | 5 | c.258 others(20): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 2/26 | chr2 | TogoVar | |||||||
SCNN1B_chr16_23297302_23386294 | 23301359 | C | CAAAAA | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(145): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(12): Show | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0009 others(145): Show |
148 | 306 | 0.4837 | 5 | c.-10 others(16): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 942 | chr16 | TogoVar | |||||||
SCNN1B_chr16_23297302_23386294 | 23305534 | T | TATATA | intron_variant | MODIFIER | HG03704.hp2 HG04228.hp2 NA18995.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0275 others(1): Show |
4 | 306 | 0.0131 | 5 | c.-9+ others(20): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 1/12 | chr16 | TogoVar | |||||||
SCNN1B_chr16_23297302_23386294 | 23305581 | A | AAATAT | intron_variant | MODIFIER | HG01123.hp2 HG02055.hp1 HG02572.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0099 others(2): Show |
5 | 306 | 0.0163 | 5 | c.-9+ others(20): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 1/12 | chr16 | TogoVar | |||||||
SCNN1B_chr16_23297302_23386294 | 23343671 | G | GGAAGA | intron_variant | MODIFIER | HG02486.hp1 HG02630.hp1 NA18906.hp2 |
a0001 | a0001c0008 | a0001c0008t0001a0001c0008t0003 | a0001c0008t0001g0148 a0001c0008t0001g0291 a0001c0008t0003g0091 |
3 | 306 | 0.0098 | 5 | c.-8- others(20): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 1/12 | chr16 | TogoVar | |||||||
SCNN1B_chr16_23297302_23386294 | 23346200 | C | CTTTTT | intron_variant | MODIFIER | HG00438.hp1 HG02040.hp2 HG02109.hp2 others(20): Show |
a0001a0002 | a0001c0001a0001c0006a0002c0004 | a0001c0001t0001a0001c0001t0006a0001c0006t0001others(1): Show | a0001c0001t0001g0021 a0001c0001t0001g0024 a0001c0001t0001g0044 others(20): Show |
23 | 306 | 0.0752 | 5 | c.-8- others(20): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289854 | C | CCCCGT | intron_variant | MODIFIER | HG01516.hp2 HG01884.hp2 HG01891.hp1 others(11): Show |
a0001a0002a0008others(1): Show | a0001c0001a0002c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(5): Show | a0001c0001t0001g0177 a0001c0001t0001g0237 a0001c0001t0002g0225 others(11): Show |
14 | 290 | 0.0483 | 5 | c.166 others(22): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCNN1D_chr1_1275436_1297025 | 1289854 | C | CTCCGT | intron_variant | MODIFIER | HG00099.hp2 HG00642.hp2 HG00735.hp1 others(33): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0009a0001c0012others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0009t0001others(16): Show | a0001c0001t0001g0162 a0001c0001t0001g0167 a0001c0001t0001g0178 others(33): Show |
36 | 290 | 0.1241 | 5 | c.166 others(22): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | chr1 | TogoVar | |||||||
SCNN1D_chr1_1275436_1297025 | 1293960 | T | TCGGGG | downstream_gene_variant | MODIFIER | HG01192.hp1 HG01261.hp1 HG01975.hp1 |
a0001a0020 | a0001c0001a0020c0066 | a0001c0001t0001a0001c0001t0002a0020c0066t0001 | a0001c0001t0001g0223 a0001c0001t0002g0221 a0020c0066t0001g0209 |
3 | 290 | 0.0103 | 5 | c.*23 others(16): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 1936 | chr1 | TogoVar | |||||||
SCNN1G_chr16_23177745_23221883 | 23182162 | C | CAAAAA | upstream_gene_variant | MODIFIER | HG01123.hp1 HG02300.hp1 HG02300.hp2 others(8): Show |
a0001a0002 | a0001c0002a0001c0008a0002c0006 | a0001c0002t0003a0001c0002t0004a0001c0008t0001others(1): Show | a0001c0002t0003g0285 a0001c0002t0003g0293 a0001c0002t0003g0297 others(8): Show |
11 | 320 | 0.0344 | 5 | c.-69 others(14): Show |
SCNN1G | ENSG00000166828.3 | transcript | ENST00000300061.3 | protein_coding | 582 | chr16 | TogoVar | |||||||
SCO1_chr17_10667474_10702533 | 10689115 | C | CAAAAA | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(172): Show |
a0001a0002a0003 | a0001c0001a0001c0004a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(58): Show | a0001c0001t0001g0001 a0001c0001t0001g0019 a0001c0001t0001g0023 others(107): Show |
175 | 416 | 0.4207 | 5 | c.656 others(22): Show |
SCO1 | ENSG00000133028.12 | transcript | ENST00000255390.10 | protein_coding | 4/5 | chr17 | TogoVar | |||||||
SCO1_chr17_10667474_10702533 | 10696071 | T | TAAAAA | intron_variant | MODIFIER | HG00438.hp1 HG00621.hp2 HG00642.hp1 others(25): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0011others(7): Show | a0001c0001t0001g0140 a0001c0001t0001g0142 a0001c0001t0003g0012 others(17): Show |
28 | 416 | 0.0673 | 5 | c.274 others(20): Show |
SCO1 | ENSG00000133028.12 | transcript | ENST00000255390.10 | protein_coding | 1/5 | chr17 | TogoVar | |||||||
SCP2_chr1_52922276_53056698 | 52934592 | C | CTTTTT | intron_variant | MODIFIER | HG00140.hp1 HG00438.hp1 HG00544.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0002t0003others(1): Show | a0001c0001t0001g0091 a0001c0001t0001g0216 a0001c0001t0001g0217 others(5): Show |
8 | 280 | 0.0286 | 5 | c.69+ others(20): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCP2_chr1_52922276_53056698 | 52938000 | T | TATAAG | intron_variant | MODIFIER | HG01884.hp1 HG02055.hp1 HG02109.hp1 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0006a0001c0002t0006a0001c0003t0001others(3): Show | a0001c0001t0006g0031 a0001c0001t0006g0034 a0001c0001t0006g0035 others(11): Show |
14 | 280 | 0.0500 | 5 | c.70- others(20): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 1/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCP2_chr1_52922276_53056698 | 52970968 | A | ATTTTT | intron_variant | MODIFIER | HG00423.hp1 HG02723.hp2 HG04204.hp2 others(6): Show |
a0001 | a0001c0002a0001c0004 | a0001c0002t0001a0001c0002t0002a0001c0004t0004 | a0001c0002t0001g0270 a0001c0002t0002g0102 a0001c0002t0002g0106 others(6): Show |
9 | 280 | 0.0321 | 5 | c.524 others(22): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCP2_chr1_52922276_53056698 | 52987007 | T | TATATA | intron_variant | MODIFIER | HG00438.hp1 HG01071.hp1 HG01928.hp2 others(10): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(1): Show | a0001c0001t0001g0251 a0001c0001t0003g0224 a0001c0001t0003g0232 others(10): Show |
13 | 280 | 0.0464 | 5 | c.974 others(22): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 10/15 | chr1 | TogoVar | |||||||
SCP2_chr1_52922276_53056698 | 53013446 | A | AAAAAT | intron_variant | MODIFIER | HG00323.hp2 HG00438.hp1 HG01069.hp2 others(22): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0251 a0001c0001t0002g0010 a0001c0001t0002g0011 others(22): Show |
25 | 280 | 0.0893 | 5 | c.108 others(24): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 11/15 | chr1 | TogoVar | |||||||
SCP2_chr1_52922276_53056698 | 53025231 | G | GCTCTT | intron_variant | MODIFIER | HG00323.hp2 HG00423.hp1 HG00438.hp1 others(92): Show |
a0001 | a0001c0001a0001c0002a0001c0007others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0251 a0001c0001t0002g0010 a0001c0001t0002g0011 others(92): Show |
95 | 280 | 0.3393 | 5 | c.123 others(24): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCP2_chr1_52922276_53056698 | 53037922 | A | ACACAC | intron_variant | MODIFIER | HG02486.hp1 HG02965.hp1 HG02970.hp2 others(2): Show |
a0001 | a0001c0003 | a0001c0003t0004a0001c0003t0008 | a0001c0003t0004g0016 a0001c0003t0004g0017 a0001c0003t0004g0022 others(2): Show |
5 | 280 | 0.0179 | 5 | c.133 others(22): Show |
SCP2 | ENSG00000116171.19 | transcript | ENST00000371514.8 | protein_coding | 13/15 | INFO_REALIGN_3_PRIME | chr1 | TogoVar |