view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPECC1_chr17_20004359_20324026 | 20051068 | T | TTCTCTTT others(1): Show |
intron_variant | MODIFIER | HG01993.hp2 HG02155.hp2 NA19081.hp1 |
a0001a0004 | a0001c0003a0004c0005 | a0001c0003t0033a0004c0005t0009a0004c0005t0023 | a0001c0003t0033g0164 a0004c0005t0009g0226 a0004c0005t0023g0234 |
3 | 250 | 0.0120 | 8 | c.-22 others(27): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20082994 | G | GTTCGTTC others(1): Show |
intron_variant | MODIFIER | HG02109.hp2 HG02145.hp2 HG02717.hp2 others(2): Show |
a0001 | a0001c0006 | a0001c0006t0022a0001c0006t0044a0001c0006t0045others(1): Show | a0001c0006t0022g0068 a0001c0006t0022g0070 a0001c0006t0044g0069 others(2): Show |
5 | 250 | 0.0200 | 8 | c.-21 others(27): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20083002 | G | GTTCGTTC others(1): Show |
intron_variant | MODIFIER | HG02647.hp2 HG02809.hp1 |
a0001 | a0001c0003 | a0001c0003t0035a0001c0003t0040 | a0001c0003t0035g0243 a0001c0003t0040g0206 |
2 | 250 | 0.0080 | 8 | c.-21 others(27): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20118115 | T | TAATAAAT others(1): Show |
intron_variant | MODIFIER | HG02630.hp1 HG02895.hp2 HG03041.hp2 others(2): Show |
a0001 | a0001c0003 | a0001c0003t0007a0001c0003t0017a0001c0003t0018 | a0001c0003t0007g0057 a0001c0003t0007g0059 a0001c0003t0007g0062 others(2): Show |
5 | 250 | 0.0200 | 8 | c.283 others(25): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20182119 | C | CTTTTTTT others(1): Show |
intron_variant | MODIFIER | HG01952.hp1 HG01993.hp2 HG02109.hp1 others(12): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0006others(2): Show | a0001c0001t0078a0001c0001t0085a0001c0001t0086others(11): Show | a0001c0001t0078g0116 a0001c0001t0085g0183 a0001c0001t0086g0159 others(12): Show |
15 | 250 | 0.0600 | 8 | c.284 others(27): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20190394 | G | GCTGCTGC others(1): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00408.hp1 others(99): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0006others(6): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(49): Show | a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0110 others(99): Show |
102 | 250 | 0.4080 | 8 | c.284 others(27): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20251224 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG01261.hp1 HG02145.hp1 HG02148.hp2 others(5): Show |
a0001a0003 | a0001c0003a0003c0004a0003c0007 | a0001c0003t0032a0001c0003t0040a0003c0004t0003others(3): Show | a0001c0003t0032g0156 a0001c0003t0032g0163 a0001c0003t0040g0206 others(5): Show |
8 | 250 | 0.0320 | 8 | c.259 others(27): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 9/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20254134 | C | CGTGTGTG others(1): Show |
intron_variant | MODIFIER | HG01981.hp1 HG02015.hp2 HG02027.hp1 others(15): Show |
a0001 | a0001c0001a0001c0003a0001c0016 | a0001c0001t0002a0001c0001t0004a0001c0001t0013others(9): Show | a0001c0001t0002g0117 a0001c0001t0004g0007 a0001c0001t0004g0145 others(15): Show |
18 | 250 | 0.0720 | 8 | c.268 others(25): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 10/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20317259 | A | AATTTTTT others(1): Show |
3_prime_UTR_variant | MODIFIER | HG02258.hp1 HG02717.hp1 HG03540.hp1 others(1): Show |
a0001 | a0001c0003a0001c0010 | a0001c0003t0032a0001c0003t0071a0001c0010t0099 | a0001c0003t0032g0156 a0001c0003t0032g0163 a0001c0003t0071g0054 others(1): Show |
4 | 250 | 0.0160 | 8 | c.*31 others(19): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 15/15 | 3195 | chr17 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20317259 | A | ATTTTTTT others(1): Show |
3_prime_UTR_variant | MODIFIER | HG01070.hp1 HG01099.hp2 HG01106.hp1 others(36): Show |
a0001a0002a0003others(1): Show | a0001c0003a0002c0002a0003c0004others(3): Show | a0001c0003t0018a0001c0003t0033a0001c0003t0039others(16): Show | a0001c0003t0018g0061 a0001c0003t0018g0213 a0001c0003t0033g0146 others(36): Show |
39 | 250 | 0.1560 | 8 | c.*32 others(19): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 15/15 | 3216 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SPEF1_chr20_3772504_3786448 | 3780312 | C | CGACAAGA others(1): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00642.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0017 | 5 | 418 | 0.0120 | 8 | c.110 others(23): Show |
SPEF1 | ENSG00000101222.12 | transcript | ENST00000379756.3 | protein_coding | 1/6 | chr20 | TogoVar | |||||||
SPEF2_chr5_35612863_35819611 | 35661254 | T | TTATATAT others(1): Show |
intron_variant | MODIFIER | HG01257.hp2 HG01261.hp2 HG02735.hp2 others(1): Show |
a0001a0009a0042 | a0001c0002a0009c0010a0042c0031 | a0001c0002t0001a0009c0010t0001a0042c0031t0001 | a0001c0002t0001g0062 a0001c0002t0001g0091 a0009c0010t0001g0047 others(1): Show |
4 | 268 | 0.0149 | 8 | c.116 others(27): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 8/36 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPEF2_chr5_35612863_35819611 | 35714680 | T | TTTTATTT others(1): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00558.hp1 HG00673.hp1 others(58): Show |
a0001a0002a0004others(15): Show | a0001c0002a0001c0003a0002c0001others(19): Show | a0001c0002t0001a0001c0003t0001a0002c0001t0001others(19): Show | a0001c0002t0001g0049 a0001c0002t0001g0058 a0001c0002t0001g0075 others(58): Show |
61 | 268 | 0.2276 | 8 | c.291 others(27): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 20/36 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPEF2_chr5_35612863_35819611 | 35751025 | G | GTATATAT others(1): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00408.hp2 HG00438.hp1 others(31): Show |
a0001a0003a0004others(5): Show | a0001c0002a0001c0003a0003c0004others(8): Show | a0001c0002t0001a0001c0003t0001a0003c0004t0001others(8): Show | a0001c0002t0001g0067 a0001c0003t0001g0031 a0003c0004t0001g0004 others(31): Show |
34 | 268 | 0.1269 | 8 | c.333 others(27): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 23/36 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPEF2_chr5_35612863_35819611 | 35751034 | T | TATATATA others(1): Show |
intron_variant | MODIFIER | HG00642.hp1 HG01074.hp1 HG03239.hp2 |
a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0069 a0003c0004t0001g0096 a0003c0004t0001g0097 |
3 | 268 | 0.0112 | 8 | c.333 others(27): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 23/36 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPEF2_chr5_35612863_35819611 | 35751092 | C | CATATATA others(1): Show |
intron_variant | MODIFIER | HG01109.hp1 HG02896.hp2 HG03834.hp2 |
a0003a0011 | a0003c0004a0011c0024 | a0003c0004t0001a0011c0024t0001 | a0003c0004t0001g0121 a0003c0004t0001g0122 a0011c0024t0001g0139 |
3 | 268 | 0.0112 | 8 | c.333 others(27): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 23/36 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPEF2_chr5_35612863_35819611 | 35769989 | A | ATATCTGT others(1): Show |
intron_variant | MODIFIER | HG00140.hp1 HG00408.hp2 HG00438.hp1 others(30): Show |
a0001a0003a0004others(6): Show | a0001c0002a0003c0004a0003c0022others(8): Show | a0001c0002t0001a0003c0004t0001a0003c0022t0001others(8): Show | a0001c0002t0001g0044 a0001c0002t0001g0067 a0003c0004t0001g0005 others(30): Show |
33 | 268 | 0.1231 | 8 | c.380 others(27): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 26/36 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPEF2_chr5_35612863_35819611 | 35777664 | C | CAAATAAA others(1): Show |
intron_variant | MODIFIER | HG00408.hp1 HG00558.hp2 HG00673.hp2 others(39): Show |
a0001a0002a0004others(7): Show | a0001c0002a0001c0003a0002c0001others(9): Show | a0001c0002t0001a0001c0003t0001a0002c0001t0001others(9): Show | a0001c0002t0001g0022 a0001c0002t0001g0060 a0001c0002t0001g0199 others(38): Show |
42 | 268 | 0.1567 | 8 | c.421 others(27): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 29/36 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPEF2_chr5_35612863_35819611 | 35793759 | C | CACACACA others(1): Show |
intron_variant | MODIFIER | HG01192.hp2 HG02145.hp1 HG02486.hp2 others(6): Show |
a0001a0002a0043 | a0001c0003a0002c0001a0002c0041others(1): Show | a0001c0003t0001a0002c0001t0001a0002c0041t0001others(1): Show | a0001c0003t0001g0073 a0002c0001t0001g0148 a0002c0001t0001g0149 others(6): Show |
9 | 268 | 0.0336 | 8 | c.473 others(25): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 32/36 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPEF2_chr5_35612863_35819611 | 35797317 | G | GGTGTGTC others(1): Show |
intron_variant | MODIFIER | HG01109.hp1 HG01175.hp2 HG01496.hp1 others(17): Show |
a0001a0003a0005others(3): Show | a0001c0003a0003c0004a0005c0006others(3): Show | a0001c0003t0001a0003c0004t0001a0005c0006t0001others(3): Show | a0001c0003t0001g0108 a0003c0004t0001g0006 a0003c0004t0001g0098 others(14): Show |
20 | 268 | 0.0746 | 8 | c.483 others(27): Show |
SPEF2 | ENSG00000152582.14 | transcript | ENST00000356031.8 | protein_coding | 33/36 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPEG_chr2_219429843_219498629 | 219431548 | T | TTTCCTTC others(1): Show |
upstream_gene_variant | MODIFIER | HG02109.hp2 HG02723.hp2 HG02886.hp2 others(1): Show |
a0001a0002a0007 | a0001c0002a0002c0008a0007c0013 | a0001c0002t0002a0002c0008t0002a0007c0013t0003 | a0001c0002t0002g0282 a0002c0008t0002g0214 a0002c0008t0002g0215 others(1): Show |
4 | 304 | 0.0132 | 8 | c.-34 others(19): Show |
SPEG | ENSG00000072195.15 | transcript | ENST00000312358.12 | protein_coding | 3294 | chr2 | TogoVar | |||||||
SPEG_chr2_219429843_219498629 | 219440561 | T | TTTTATTT others(1): Show |
intron_variant | MODIFIER | HG02572.hp2 HG03831.hp2 HG03927.hp1 others(2): Show |
a0001a0002a0046others(1): Show | a0001c0002a0002c0003a0046c0074others(1): Show | a0001c0002t0001a0002c0003t0002a0002c0003t0005others(2): Show | a0001c0002t0001g0219 a0002c0003t0002g0101 a0002c0003t0005g0099 others(2): Show |
5 | 304 | 0.0165 | 8 | c.389 others(25): Show |
SPEG | ENSG00000072195.15 | transcript | ENST00000312358.12 | protein_coding | 1/40 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPEM1_chr17_7415324_7426632 | 7424547 | T | TTTCCTTC others(1): Show |
downstream_gene_variant | MODIFIER | HG00280.hp2 HG00558.hp2 HG00609.hp2 others(16): Show |
a0001 | a0001c0001a0001c0006a0001c0008 | a0001c0001t0001a0001c0006t0001a0001c0008t0001 | a0001c0001t0001g0001 a0001c0006t0001g0001 a0001c0008t0001g0001 |
19 | 398 | 0.0477 | 8 | c.*29 others(19): Show |
SPEM1 | ENSG00000181323.8 | transcript | ENST00000323675.4 | protein_coding | 2916 | chr17 | TogoVar | |||||||
SPEM2_chr17_7420616_7432568 | 7424547 | T | TTTCCTTC others(1): Show |
upstream_gene_variant | MODIFIER | HG00280.hp2 HG00558.hp2 HG00609.hp2 others(17): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0001 a0002c0002t0001g0001 |
20 | 364 | 0.0550 | 8 | c.-11 others(19): Show |
SPEM2 | ENSG00000184560.8 | transcript | ENST00000333870.8 | protein_coding | 1068 | chr17 | TogoVar | |||||||
SPEM3_chr17_7423857_7437820 | 7424547 | T | TTTCCTTC others(1): Show |
upstream_gene_variant | MODIFIER | HG00280.hp1 HG00558.hp2 HG00733.hp2 others(11): Show |
a0001a0015 | a0001c0001a0015c0025 | a0001c0001t0001a0015c0025t0001 | a0001c0001t0001g0001 a0015c0025t0001g0001 |
14 | 354 | 0.0396 | 8 | c.-43 others(19): Show |
SPEM3 | ENSG00000283439.4 | transcript | ENST00000636696.4 | protein_coding | 4309 | chr17 | TogoVar | |||||||
SPEN_chr1_15842707_15945456 | 15859905 | C | CTTTTTTT others(1): Show |
intron_variant | MODIFIER | HG00741.hp2 HG01074.hp2 HG01243.hp2 others(3): Show |
a0001 | a0001c0001a0001c0004a0001c0043 | a0001c0001t0006a0001c0004t0001a0001c0043t0001 | a0001c0001t0006g0097 a0001c0004t0001g0083 a0001c0004t0001g0084 others(3): Show |
6 | 304 | 0.0197 | 8 | c.83+ others(25): Show |
SPEN | ENSG00000065526.13 | transcript | ENST00000375759.8 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SPEN_chr1_15842707_15945456 | 15860378 | G | GGTGTGTG others(1): Show |
intron_variant | MODIFIER | HG00642.hp2 HG01516.hp1 HG02132.hp1 others(3): Show |
a0001a0002a0016 | a0001c0001a0001c0004a0001c0015others(2): Show | a0001c0001t0001a0001c0004t0001a0001c0015t0001others(2): Show | a0001c0001t0001g0057 a0001c0001t0001g0298 a0001c0004t0001g0084 others(3): Show |
6 | 304 | 0.0197 | 8 | c.83+ others(25): Show |
SPEN | ENSG00000065526.13 | transcript | ENST00000375759.8 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SPEN_chr1_15842707_15945456 | 15869580 | G | GTATTTAT others(1): Show |
intron_variant | MODIFIER | HG00558.hp2 HG00621.hp1 HG00639.hp2 others(96): Show |
a0001a0002a0004others(11): Show | a0001c0001a0001c0004a0001c0023others(17): Show | a0001c0001t0001a0001c0001t0006a0001c0004t0001others(19): Show | a0001c0001t0001g0065 a0001c0001t0001g0069 a0001c0001t0001g0070 others(96): Show |
99 | 304 | 0.3257 | 8 | c.84- others(23): Show |
SPEN | ENSG00000065526.13 | transcript | ENST00000375759.8 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SPEN_chr1_15842707_15945456 | 15898173 | T | TTGTGTGT others(1): Show |
intron_variant | MODIFIER | HG01256.hp1 HG01261.hp2 HG01516.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 others(4): Show |
7 | 304 | 0.0230 | 8 | c.882 others(27): Show |
SPEN | ENSG00000065526.13 | transcript | ENST00000375759.8 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SPEN_chr1_15842707_15945456 | 15904452 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG01106.hp2 HG01884.hp1 HG01891.hp2 others(5): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0001 | a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0194 others(5): Show |
8 | 304 | 0.0263 | 8 | c.882 others(25): Show |
SPEN | ENSG00000065526.13 | transcript | ENST00000375759.8 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SPEN_chr1_15842707_15945456 | 15936642 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00280.hp2 others(86): Show |
a0001a0003a0005others(8): Show | a0001c0001a0001c0014a0003c0003others(9): Show | a0001c0001t0001a0001c0014t0001a0003c0003t0001others(10): Show | a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0014 others(86): Show |
89 | 304 | 0.2928 | 8 | c.100 others(27): Show |
SPEN | ENSG00000065526.13 | transcript | ENST00000375759.8 | protein_coding | 11/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SPG11_chr15_44557696_44668662 | 44641586 | T | TACACACA others(1): Show |
intron_variant | MODIFIER | HG00408.hp2 HG00423.hp1 HG00609.hp2 others(6): Show |
a0001a0003a0021 | a0001c0001a0003c0003a0021c0018 | a0001c0001t0001a0003c0003t0001a0021c0018t0001 | a0001c0001t0001g0039 a0001c0001t0001g0069 a0001c0001t0001g0070 others(6): Show |
9 | 190 | 0.0474 | 8 | c.160 others(27): Show |
SPG11 | ENSG00000104133.16 | transcript | ENST00000261866.12 | protein_coding | 7/39 | chr15 | TogoVar | |||||||
SPG21_chr15_64958022_64994914 | 64980737 | C | CAACAAAC others(1): Show |
intron_variant | MODIFIER | HG00609.hp1 HG01884.hp1 HG02886.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0007 | a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 others(3): Show |
9 | 352 | 0.0256 | 8 | c.225 others(23): Show |
SPG21 | ENSG00000090487.11 | transcript | ENST00000204566.7 | protein_coding | 3/8 | chr15 | TogoVar | |||||||
SPHKAP_chr2_227974955_228186687 | 228063143 | C | CCTATCTA others(1): Show |
intron_variant | MODIFIER | HG00408.hp2 HG00558.hp2 HG01099.hp2 others(31): Show |
a0001a0002a0004others(5): Show | a0001c0001a0002c0002a0004c0003others(7): Show | a0001c0001t0002a0001c0001t0008a0002c0002t0001others(10): Show | a0001c0001t0002g0053 a0001c0001t0002g0085 a0001c0001t0002g0219 others(31): Show |
34 | 322 | 0.1056 | 8 | c.247 others(27): Show |
SPHKAP | ENSG00000153820.13 | transcript | ENST00000392056.8 | protein_coding | 3/11 | chr2 | TogoVar | |||||||
SPHKAP_chr2_227974955_228186687 | 228063174 | A | ATCTATCT others(1): Show |
intron_variant | MODIFIER | HG00642.hp1 HG01106.hp1 HG01106.hp2 others(9): Show |
a0002a0003a0004others(2): Show | a0002c0002a0003c0005a0004c0003others(2): Show | a0002c0002t0001a0003c0005t0006a0004c0003t0001others(2): Show | a0002c0002t0001g0024 a0003c0005t0006g0121 a0003c0005t0006g0122 others(9): Show |
12 | 322 | 0.0373 | 8 | c.247 others(27): Show |
SPHKAP | ENSG00000153820.13 | transcript | ENST00000392056.8 | protein_coding | 3/11 | chr2 | TogoVar | |||||||
SPHKAP_chr2_227974955_228186687 | 228063174 | A | ATCTGTCT others(1): Show |
intron_variant | MODIFIER | HG02615.hp1 HG02717.hp1 HG02976.hp2 others(5): Show |
a0002a0003a0004others(1): Show | a0002c0002a0003c0005a0004c0003others(1): Show | a0002c0002t0001a0003c0005t0006a0004c0003t0001others(2): Show | a0002c0002t0001g0023 a0003c0005t0006g0115 a0004c0003t0001g0265 others(5): Show |
8 | 322 | 0.0248 | 8 | c.247 others(27): Show |
SPHKAP | ENSG00000153820.13 | transcript | ENST00000392056.8 | protein_coding | 3/11 | chr2 | TogoVar | |||||||
SPHKAP_chr2_227974955_228186687 | 228113603 | A | ATCTCTCT others(1): Show |
intron_variant | MODIFIER | HG02922.hp2 NA19005.hp1 NA19043.hp1 others(1): Show |
a0001a0003a0005others(1): Show | a0001c0001a0003c0006a0005c0004others(1): Show | a0001c0001t0002a0003c0006t0001a0005c0004t0003others(1): Show | a0001c0001t0002g0319 a0003c0006t0001g0061 a0005c0004t0003g0245 others(1): Show |
4 | 322 | 0.0124 | 8 | c.139 others(25): Show |
SPHKAP | ENSG00000153820.13 | transcript | ENST00000392056.8 | protein_coding | 2/11 | chr2 | TogoVar | |||||||
SPHKAP_chr2_227974955_228186687 | 228132843 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG01496.hp1 HG01884.hp1 HG02559.hp1 others(15): Show |
a0001a0003a0004others(2): Show | a0001c0001a0003c0005a0003c0006others(3): Show | a0001c0001t0002a0003c0005t0001a0003c0005t0005others(6): Show | a0001c0001t0002g0161 a0001c0001t0002g0198 a0001c0001t0002g0241 others(15): Show |
18 | 322 | 0.0559 | 8 | c.33- others(21): Show |
SPHKAP | ENSG00000153820.13 | transcript | ENST00000392056.8 | protein_coding | 1/11 | chr2 | TogoVar | |||||||
SPHKAP_chr2_227974955_228186687 | 228133306 | C | CAAATAAA others(1): Show |
intron_variant | MODIFIER | HG02258.hp2 HG02896.hp2 NA19043.hp2 |
a0003a0004 | a0003c0006a0004c0019 | a0003c0006t0001a0004c0019t0003 | a0003c0006t0001g0098 a0003c0006t0001g0099 a0004c0019t0003g0111 |
3 | 322 | 0.0093 | 8 | c.33- others(23): Show |
SPHKAP | ENSG00000153820.13 | transcript | ENST00000392056.8 | protein_coding | 1/11 | chr2 | TogoVar | |||||||
SPHKAP_chr2_227974955_228186687 | 228134234 | G | GAGGGAGG others(1): Show |
intron_variant | MODIFIER | HG00408.hp2 HG00609.hp2 HG00642.hp1 others(40): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0002a0003c0005others(6): Show | a0001c0001t0002a0002c0002t0001a0002c0002t0013others(10): Show | a0001c0001t0002g0006 a0001c0001t0002g0153 a0001c0001t0002g0241 others(40): Show |
43 | 322 | 0.1335 | 8 | c.33- others(23): Show |
SPHKAP | ENSG00000153820.13 | transcript | ENST00000392056.8 | protein_coding | 1/11 | chr2 | TogoVar | |||||||
SPHKAP_chr2_227974955_228186687 | 228154481 | A | ACTCTCTC others(1): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00639.hp2 HG01099.hp1 others(3): Show |
a0002a0004a0005 | a0002c0002a0004c0003a0005c0004 | a0002c0002t0001a0004c0003t0001a0005c0004t0003 | a0002c0002t0001g0268 a0004c0003t0001g0280 a0004c0003t0001g0281 others(3): Show |
6 | 322 | 0.0186 | 8 | c.33- others(25): Show |
SPHKAP | ENSG00000153820.13 | transcript | ENST00000392056.8 | protein_coding | 1/11 | chr2 | TogoVar | |||||||
SPHKAP_chr2_227974955_228186687 | 228154512 | C | CTCTATAT others(1): Show |
intron_variant | MODIFIER | HG01261.hp1 HG03710.hp1 NA18939.hp2 others(1): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0024others(1): Show | a0001c0001t0002a0002c0002t0001a0003c0024t0001others(1): Show | a0001c0001t0002g0196 a0002c0002t0001g0317 a0003c0024t0001g0288 others(1): Show |
4 | 322 | 0.0124 | 8 | c.33- others(25): Show |
SPHKAP | ENSG00000153820.13 | transcript | ENST00000392056.8 | protein_coding | 1/11 | chr2 | TogoVar | |||||||
SPHKAP_chr2_227974955_228186687 | 228154512 | C | CTCTCTAT others(1): Show |
intron_variant | MODIFIER | HG00738.hp2 HG00741.hp1 HG02257.hp2 others(1): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0004c0003 | a0001c0001t0002a0002c0002t0001a0004c0003t0001others(1): Show | a0001c0001t0002g0207 a0002c0002t0001g0199 a0004c0003t0001g0282 others(1): Show |
4 | 322 | 0.0124 | 8 | c.33- others(25): Show |
SPHKAP | ENSG00000153820.13 | transcript | ENST00000392056.8 | protein_coding | 1/11 | chr2 | TogoVar | |||||||
SPI1_chr11_47349860_47383547 | 47381487 | T | TTATATAT others(1): Show |
upstream_gene_variant | MODIFIER | HG00438.hp1 HG00639.hp1 HG01069.hp1 others(29): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004 | a0001c0001t0001g0003 a0001c0001t0001g0029 a0001c0001t0001g0044 others(27): Show |
32 | 390 | 0.0821 | 8 | c.-31 others(19): Show |
SPI1 | ENSG00000066336.13 | transcript | ENST00000378538.8 | protein_coding | 2941 | chr11 | TogoVar | |||||||
SPICE1_chr3_113437718_113520156 | 113486862 | G | GATATATA others(1): Show |
intron_variant | MODIFIER | NA18945.hp2 NA18946.hp1 NA18957.hp1 others(2): Show |
a0003 | a0003c0005 | a0003c0005t0004 | a0003c0005t0004g0167 a0003c0005t0004g0168 a0003c0005t0004g0169 others(2): Show |
5 | 364 | 0.0137 | 8 | c.611 others(25): Show |
SPICE1 | ENSG00000163611.11 | transcript | ENST00000295872.8 | protein_coding | 7/17 | chr3 | TogoVar | |||||||
SPICE1_chr3_113437718_113520156 | 113491624 | C | CAAAAAAA others(1): Show |
intron_variant | MODIFIER | HG00639.hp2 HG01069.hp2 HG01070.hp1 others(40): Show |
a0001a0002a0005 | a0001c0002a0002c0003a0002c0008others(1): Show | a0001c0002t0003a0001c0002t0014a0002c0003t0005others(3): Show | a0001c0002t0003g0007 a0001c0002t0003g0248 a0001c0002t0003g0249 others(39): Show |
43 | 364 | 0.1181 | 8 | c.492 others(25): Show |
SPICE1 | ENSG00000163611.11 | transcript | ENST00000295872.8 | protein_coding | 6/17 | chr3 | TogoVar | |||||||
SPIC_chr12_101470336_101491997 | 101479172 | A | AAAAGAAA others(1): Show |
intron_variant | MODIFIER | HG01167.hp1 HG01169.hp2 HG01433.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0020 a0001c0001t0001g0042 a0001c0001t0001g0044 others(11): Show |
18 | 398 | 0.0452 | 8 | c.98- others(21): Show |
SPIC | ENSG00000166211.8 | transcript | ENST00000551346.2 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SPIC_chr12_101470336_101491997 | 101479307 | A | AAAAGAAA others(1): Show |
intron_variant | MODIFIER | HG00621.hp1 HG01167.hp1 HG01169.hp2 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0042 a0001c0001t0001g0045 a0001c0001t0001g0048 others(12): Show |
18 | 398 | 0.0452 | 8 | c.98- others(21): Show |
SPIC | ENSG00000166211.8 | transcript | ENST00000551346.2 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SPIDR_chr8_47255938_47741306 | 47435326 | C | CTGTGTGT others(1): Show |
intron_variant | MODIFIER | HG02615.hp1 HG02965.hp1 HG03486.hp1 |
a0004 | a0004c0004 | a0004c0004t0002 | a0004c0004t0002g0120 a0004c0004t0002g0122 a0004c0004t0002g0123 |
3 | 216 | 0.0139 | 8 | c.878 others(25): Show |
SPIDR | ENSG00000164808.17 | transcript | ENST00000297423.9 | protein_coding | 7/19 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SPIDR_chr8_47255938_47741306 | 47496810 | A | ATGTTTGT others(1): Show |
intron_variant | MODIFIER | HG02257.hp1 HG02809.hp2 HG03654.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0178 a0001c0001t0001g0181 a0001c0001t0001g0194 others(4): Show |
7 | 216 | 0.0324 | 8 | c.109 others(29): Show |
SPIDR | ENSG00000164808.17 | transcript | ENST00000297423.9 | protein_coding | 8/19 | INFO_REALIGN_3_PRIME | chr8 | TogoVar |