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geneid	25876
ensemblid	ENSG00000101222.12
hgncid	15874
symbol	SPEF1
name	sperm flagellar 1
refseq_nuc	NM_015417.5
refseq_prot	NP_056232.2
ensembl_nuc	ENST00000379756.3
ensembl_prot	ENSP00000369080.3
mane_status	MANE Select
chr	chr20
start	3777504
end	3781448
strand	-
ver	v1.2
region	chr20:3777504-3781448
region5000	chr20:3772504-3786448
regionname0	SPEF1_chr20_3777504_3781448
regionname5000	SPEF1_chr20_3772504_3786448

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	236	408	85	78	179	16	48	141	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0002	0/0	236	9	9	0	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0003	0/0	236	1	0	0	1	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	711	408	85	78	179	16	48	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
c0002	0/0	711	6	6	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
c0003	0/0	711	3	3	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
c0004	0/0	711	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	870	240	63	46	90	11	28	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
t0002	0/0	870	78	8	15	40	5	10	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
t0003	0/0	870	31	0	8	19	0	4	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
t0004	0/0	870	29	0	0	27	0	2	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
t0005	0/0	870	27	19	5	1	0	2	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
t0006	0/0	870	4	1	0	1	0	2	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
t0007	0/0	870	3	2	1	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
t0008	0/0	870	3	0	3	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
t0009	0/0	870	2	0	0	2	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
t0010	0/0	870	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	75	0	15	53	1	6	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0002	0/0	58	9	12	33	1	3	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0003	1/0	52	2	16	21	5	7	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0004	0/0	24	0	8	12	0	4	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0005	0/0	20	18	1	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0006	0/0	20	13	2	0	1	4	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0007	0/0	17	0	0	15	0	2	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0008	0/0	9	0	1	1	1	6	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0009	0/0	9	3	2	0	2	2	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0010	0/0	8	1	2	1	1	3	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0011	0/0	5	1	0	3	1	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0012	0/0	5	0	4	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0013	0/0	5	5	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0014	0/1	5	0	3	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0015	0/0	5	5	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0016	0/0	5	0	0	5	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0017	0/0	5	1	1	0	2	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0018	0/0	4	1	3	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0019	0/0	4	0	0	4	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0020	0/0	4	4	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0021	0/0	4	3	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0022	0/0	4	0	0	4	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0023	0/0	4	1	2	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0024	0/0	3	0	0	3	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0025	0/0	3	0	0	3	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0026	0/0	3	0	0	3	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0027	0/0	3	1	0	0	0	2	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0028	0/0	3	2	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0029	0/0	3	3	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0030	0/0	3	0	3	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0031	0/0	2	1	0	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0032	0/0	2	2	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0033	0/0	2	1	1	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0034	0/0	2	2	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0035	0/0	2	0	0	2	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0036	0/0	1	0	0	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0037	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0038	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0039	0/0	1	0	1	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0040	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0041	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0042	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0043	0/0	1	0	1	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0044	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0045	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0046	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0047	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0048	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0049	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0050	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0051	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0052	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0053	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0054	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0055	0/0	1	0	0	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0056	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0057	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0058	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0059	0/0	1	0	0	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0060	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0061	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0062	0/0	1	0	0	0	1	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0063	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0064	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0065	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0066	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0067	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0068	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0069	0/0	1	0	0	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0070	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
g0071	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	711	408	85	78	179	16	48	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0002c0002	0/0	711	6	6	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0002c0003	0/0	711	3	3	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0003c0004	0/0	711	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1580	232	55	46	90	11	28	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0001c0001t0002	0/0	1580	78	8	15	40	5	10	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0001c0001t0003	0/0	1580	31	0	8	19	0	4	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0001c0001t0004	0/0	1580	28	0	0	26	0	2	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0001c0001t0005	0/0	1580	27	19	5	1	0	2	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0001c0001t0006	0/0	1580	4	1	0	1	0	2	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0001c0001t0007	0/0	1580	3	2	1	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0001c0001t0008	0/0	1580	3	0	3	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0001c0001t0009	0/0	1580	2	0	0	2	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0002c0002t0001	0/0	1580	5	5	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0002c0002t0010	0/0	1580	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0002c0003t0001	0/0	1580	3	3	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448
a0003c0004t0004	0/0	1580	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	copy fasta	chr20	3772504	3786448

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	75	0	15	53	1	6	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0003	1/0	52	2	16	21	5	7	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0005	0/0	20	18	1	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0006	0/0	20	13	2	0	1	4	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0008	0/0	9	0	1	1	1	6	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0011	0/0	5	1	0	3	1	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0014	0/1	5	0	3	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0015	0/0	5	5	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0017	0/0	5	1	1	0	2	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0018	0/0	4	1	3	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0020	0/0	4	4	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0023	0/0	4	1	2	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0024	0/0	3	0	0	3	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0025	0/0	3	0	0	3	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0031	0/0	2	1	0	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0032	0/0	2	2	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0036	0/0	1	0	0	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0037	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0038	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0039	0/0	1	0	1	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0042	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0043	0/0	1	0	1	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0044	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0045	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0048	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0054	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0056	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0064	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0001g0067	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0002	0/0	52	5	11	33	1	2	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0009	0/0	6	0	2	0	2	2	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0010	0/0	8	1	2	1	1	3	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0021	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0022	0/0	3	0	0	3	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0028	0/0	2	1	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0055	0/0	1	0	0	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0058	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0059	0/0	1	0	0	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0062	0/0	1	0	0	0	1	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0066	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0002g0069	0/0	1	0	0	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0003g0004	0/0	24	0	8	12	0	4	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0003g0019	0/0	4	0	0	4	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0003g0051	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0003g0061	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0003g0063	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0004g0007	0/0	17	0	0	15	0	2	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0004g0016	0/0	5	0	0	5	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0004g0026	0/0	3	0	0	3	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0004g0046	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0004g0050	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0004g0065	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0005g0002	0/0	6	4	1	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0005g0009	0/0	3	3	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0005g0012	0/0	5	0	4	0	0	1	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0005g0013	0/0	5	5	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0005g0021	0/0	3	3	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0005g0022	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0005g0028	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0005g0041	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0005g0049	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0005g0070	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0006g0027	0/0	3	1	0	0	0	2	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0006g0057	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0007g0033	0/0	2	1	1	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0007g0068	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0008g0030	0/0	3	0	3	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0001c0001t0009g0035	0/0	2	0	0	2	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0002c0002t0001g0029	0/0	3	3	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0002c0002t0001g0053	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0002c0002t0001g0060	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0002c0002t0010g0047	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0002c0003t0001g0034	0/0	2	2	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0002c0003t0001g0071	0/0	1	1	0	0	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
a0003c0004t0004g0052	0/0	1	0	0	1	0	0	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0003	EUR	GBR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00099	hp2	a0001	c0001	t0001	g0017	EUR	GBR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00140	hp1	a0001	c0001	t0001	g0017	EUR	GBR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00140	hp2	a0001	c0001	t0002	g0002	EUR	GBR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00280	hp1	a0001	c0001	t0001	g0003	EUR	FIN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00280	hp2	a0001	c0001	t0001	g0003	EUR	FIN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00323	hp1	a0001	c0001	t0002	g0009	EUR	FIN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00323	hp2	a0001	c0001	t0001	g0003	EUR	FIN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00408	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00408	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00423	hp2	a0001	c0001	t0004	g0007	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00438	hp2	a0001	c0001	t0001	g0056	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00558	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00558	hp2	a0001	c0001	t0003	g0004	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00597	hp2	a0001	c0001	t0001	g0045	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00609	hp2	a0001	c0001	t0002	g0002	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00621	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00621	hp2	a0001	c0001	t0004	g0007	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00639	hp1	a0001	c0001	t0001	g0006	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00639	hp2	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00642	hp2	a0001	c0001	t0001	g0017	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00673	hp1	a0001	c0001	t0002	g0002	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00673	hp2	a0001	c0001	t0001	g0025	EAS	CHS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00733	hp1	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00733	hp2	a0001	c0001	t0008	g0030	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00735	hp2	a0001	c0001	t0002	g0010	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00738	hp1	a0001	c0001	t0001	g0014	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00738	hp2	a0001	c0001	t0005	g0012	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00741	hp1	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG00741	hp2	a0001	c0001	t0002	g0010	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01069	hp1	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01069	hp2	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01070	hp1	a0001	c0001	t0005	g0012	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01071	hp1	a0001	c0001	t0005	g0012	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01071	hp2	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01074	hp1	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01074	hp2	a0001	c0001	t0001	g0018	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01081	hp1	a0001	c0001	t0002	g0002	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01081	hp2	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01099	hp1	a0001	c0001	t0002	g0009	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01106	hp1	a0001	c0001	t0001	g0008	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01106	hp2	a0001	c0001	t0002	g0002	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01109	hp2	a0001	c0001	t0001	g0005	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01167	hp2	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01168	hp1	a0001	c0001	t0005	g0012	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01168	hp2	a0001	c0001	t0008	g0030	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01169	hp1	a0001	c0001	t0008	g0030	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01175	hp1	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01175	hp2	a0001	c0001	t0001	g0003	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01243	hp1	a0001	c0001	t0002	g0002	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01243	hp2	a0001	c0001	t0007	g0033	AMR	PUR	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01255	hp2	a0001	c0001	t0001	g0043	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01256	hp1	a0001	c0001	t0003	g0004	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01256	hp2	a0001	c0001	t0001	g0003	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01258	hp1	a0001	c0001	t0001	g0039	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01258	hp2	a0001	c0001	t0003	g0004	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01346	hp2	a0001	c0001	t0003	g0004	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01358	hp1	a0001	c0001	t0001	g0018	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01358	hp2	a0001	c0001	t0001	g0003	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01361	hp1	a0001	c0001	t0001	g0014	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01361	hp2	a0001	c0001	t0002	g0002	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01433	hp1	a0001	c0001	t0001	g0006	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01433	hp2	a0001	c0001	t0001	g0003	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01496	hp1	a0001	c0001	t0001	g0023	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01496	hp2	a0001	c0001	t0002	g0009	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01516	hp1	a0001	c0001	t0002	g0010	EUR	IBS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01517	hp1	a0001	c0001	t0001	g0011	EUR	IBS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01517	hp2	a0001	c0001	t0002	g0062	EUR	IBS	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01884	hp1	a0001	c0001	t0007	g0033	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01884	hp2	a0001	c0001	t0005	g0021	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01891	hp1	a0001	c0001	t0005	g0002	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01891	hp2	a0001	c0001	t0001	g0005	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01934	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01934	hp2	a0001	c0001	t0003	g0004	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01952	hp1	a0001	c0001	t0003	g0004	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01952	hp2	a0001	c0001	t0003	g0004	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01975	hp2	a0001	c0001	t0002	g0002	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01978	hp1	a0001	c0001	t0001	g0023	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01978	hp2	a0001	c0001	t0002	g0002	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01981	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01981	hp2	a0001	c0001	t0001	g0003	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01993	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01993	hp2	a0001	c0001	t0002	g0002	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02004	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02004	hp2	a0001	c0001	t0003	g0004	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02027	hp1	a0001	c0001	t0002	g0002	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02027	hp2	a0001	c0001	t0001	g0001	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02040	hp1	a0001	c0001	t0002	g0066	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02040	hp2	a0001	c0001	t0001	g0003	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02055	hp1	a0001	c0001	t0001	g0032	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02055	hp2	a0001	c0001	t0001	g0006	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02056	hp2	a0001	c0001	t0001	g0025	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02074	hp1	a0001	c0001	t0004	g0007	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02074	hp2	a0001	c0001	t0002	g0002	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02080	hp1	a0001	c0001	t0003	g0004	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02080	hp2	a0001	c0001	t0004	g0026	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02083	hp1	a0001	c0001	t0004	g0007	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02083	hp2	a0001	c0001	t0001	g0003	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02129	hp1	a0001	c0001	t0004	g0007	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02129	hp2	a0001	c0001	t0001	g0042	EAS	KHV	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02145	hp1	a0001	c0001	t0001	g0038	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02145	hp2	a0002	c0002	t0001	g0053	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02148	hp1	a0001	c0001	t0001	g0018	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02148	hp2	a0001	c0001	t0003	g0004	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02155	hp1	a0001	c0001	t0003	g0051	EAS	CDX	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02257	hp1	a0001	c0001	t0001	g0005	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02257	hp2	a0001	c0001	t0001	g0003	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02258	hp1	a0001	c0001	t0001	g0032	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02258	hp2	a0001	c0001	t0001	g0005	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02280	hp1	a0001	c0001	t0005	g0009	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02280	hp2	a0001	c0001	t0001	g0015	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02293	hp2	a0001	c0001	t0005	g0002	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02300	hp1	a0001	c0001	t0002	g0002	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02451	hp1	a0001	c0001	t0005	g0009	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02451	hp2	a0001	c0001	t0005	g0013	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02572	hp1	a0001	c0001	t0001	g0005	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02572	hp2	a0001	c0001	t0001	g0006	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02602	hp1	a0001	c0001	t0001	g0008	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02602	hp2	a0001	c0001	t0005	g0012	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02615	hp1	a0001	c0001	t0005	g0049	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02615	hp2	a0001	c0001	t0002	g0002	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02622	hp1	a0001	c0001	t0002	g0028	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02622	hp2	a0001	c0001	t0005	g0002	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02630	hp1	a0002	c0003	t0001	g0034	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02630	hp2	a0001	c0001	t0005	g0002	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02647	hp1	a0001	c0001	t0001	g0005	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02647	hp2	a0002	c0002	t0010	g0047	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02683	hp1	a0001	c0001	t0001	g0023	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02683	hp2	a0001	c0001	t0001	g0003	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02698	hp1	a0001	c0001	t0002	g0010	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02698	hp2	a0001	c0001	t0002	g0055	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02717	hp1	a0001	c0001	t0005	g0021	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02717	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02723	hp1	a0001	c0001	t0001	g0020	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02723	hp2	a0002	c0003	t0001	g0034	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02735	hp1	a0001	c0001	t0001	g0036	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02735	hp2	a0001	c0001	t0001	g0031	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02738	hp1	a0001	c0001	t0002	g0059	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02738	hp2	a0001	c0001	t0002	g0069	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02809	hp1	a0001	c0001	t0001	g0067	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02809	hp2	a0001	c0001	t0001	g0005	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02818	hp1	a0001	c0001	t0001	g0006	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02818	hp2	a0002	c0002	t0001	g0029	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02886	hp1	a0001	c0001	t0001	g0006	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02886	hp2	a0001	c0001	t0002	g0002	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02897	hp1	a0001	c0001	t0001	g0005	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02897	hp2	a0001	c0001	t0001	g0048	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02922	hp1	a0001	c0001	t0001	g0005	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02922	hp2	a0001	c0001	t0002	g0002	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02965	hp1	a0002	c0002	t0001	g0029	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02965	hp2	a0001	c0001	t0001	g0006	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02970	hp1	a0001	c0001	t0001	g0020	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02970	hp2	a0001	c0001	t0001	g0015	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02976	hp1	a0001	c0001	t0005	g0021	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02976	hp2	a0001	c0001	t0001	g0005	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03017	hp2	a0001	c0001	t0004	g0007	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03041	hp1	a0001	c0001	t0001	g0015	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03041	hp2	a0001	c0001	t0001	g0011	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03098	hp1	a0001	c0001	t0001	g0020	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03098	hp2	a0001	c0001	t0001	g0006	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03130	hp1	a0001	c0001	t0001	g0006	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03130	hp2	a0001	c0001	t0001	g0005	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03139	hp1	a0001	c0001	t0005	g0009	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03139	hp2	a0001	c0001	t0001	g0005	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03195	hp1	a0001	c0001	t0001	g0015	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03195	hp2	a0001	c0001	t0001	g0005	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03209	hp1	a0001	c0001	t0002	g0002	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03209	hp2	a0001	c0001	t0001	g0005	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03225	hp1	a0002	c0002	t0001	g0060	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03225	hp2	a0001	c0001	t0002	g0010	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03239	hp1	a0001	c0001	t0001	g0006	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03239	hp2	a0001	c0001	t0006	g0027	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03453	hp1	a0001	c0001	t0001	g0040	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03453	hp2	a0001	c0001	t0001	g0006	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03486	hp1	a0001	c0001	t0005	g0013	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03486	hp2	a0002	c0002	t0001	g0029	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03490	hp1	a0001	c0001	t0005	g0002	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03490	hp2	a0001	c0001	t0001	g0008	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03491	hp2	a0001	c0001	t0003	g0004	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03492	hp1	a0001	c0001	t0003	g0004	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03492	hp2	a0001	c0001	t0001	g0008	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03516	hp1	a0001	c0001	t0005	g0013	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03516	hp2	a0001	c0001	t0007	g0068	AFR	ESN	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03540	hp1	a0001	c0001	t0001	g0037	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03540	hp2	a0001	c0001	t0001	g0006	AFR	GWD	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03579	hp1	a0001	c0001	t0001	g0006	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03579	hp2	a0001	c0001	t0001	g0006	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03654	hp1	a0001	c0001	t0001	g0003	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03654	hp2	a0001	c0001	t0001	g0017	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03669	hp1	a0001	c0001	t0001	g0006	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03669	hp2	a0001	c0001	t0001	g0003	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03688	hp1	a0001	c0001	t0002	g0010	SAS	STU	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03688	hp2	a0001	c0001	t0002	g0002	SAS	STU	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03704	hp1	a0001	c0001	t0002	g0002	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03704	hp2	a0001	c0001	t0001	g0008	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03710	hp2	a0001	c0001	t0006	g0027	SAS	PJL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03831	hp2	a0001	c0001	t0003	g0004	SAS	BEB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03927	hp1	a0001	c0001	t0004	g0007	SAS	BEB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03927	hp2	a0001	c0001	t0001	g0003	SAS	BEB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03942	hp2	a0001	c0001	t0001	g0005	SAS	BEB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG04115	hp1	a0001	c0001	t0002	g0009	SAS	STU	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG04115	hp2	a0001	c0001	t0001	g0003	SAS	STU	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG04184	hp1	a0001	c0001	t0001	g0003	SAS	BEB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG04184	hp2	a0001	c0001	t0003	g0004	SAS	BEB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG04199	hp1	a0001	c0001	t0002	g0010	SAS	STU	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG04199	hp2	a0001	c0001	t0001	g0008	SAS	STU	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG04204	hp2	a0001	c0001	t0001	g0003	SAS	STU	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG04228	hp1	a0001	c0001	t0001	g0006	SAS	STU	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG04228	hp2	a0001	c0001	t0001	g0008	SAS	STU	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18522	hp1	a0001	c0001	t0001	g0005	AFR	YRI	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18522	hp2	a0001	c0001	t0005	g0013	AFR	YRI	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18747	hp1	a0001	c0001	t0004	g0016	EAS	CHB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18906	hp1	a0001	c0001	t0001	g0006	AFR	YRI	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18906	hp2	a0001	c0001	t0005	g0070	AFR	YRI	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18942	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18943	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18944	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18944	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18945	hp1	a0001	c0001	t0003	g0004	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18947	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18947	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18948	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18950	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18951	hp1	a0001	c0001	t0001	g0044	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18951	hp2	a0001	c0001	t0004	g0065	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18952	hp2	a0001	c0001	t0004	g0007	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18953	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18954	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18954	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18956	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18957	hp2	a0001	c0001	t0002	g0022	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18959	hp1	a0001	c0001	t0004	g0007	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18959	hp2	a0001	c0001	t0006	g0057	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18960	hp1	a0001	c0001	t0004	g0007	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18960	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18964	hp1	a0001	c0001	t0004	g0016	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18965	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18965	hp2	a0001	c0001	t0001	g0011	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18966	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18967	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18967	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18968	hp2	a0001	c0001	t0003	g0019	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18969	hp1	a0001	c0001	t0004	g0050	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18970	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18971	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18971	hp2	a0001	c0001	t0002	g0021	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18973	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18973	hp2	a0001	c0001	t0004	g0007	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18974	hp1	a0001	c0001	t0001	g0024	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18974	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18979	hp1	a0001	c0001	t0003	g0063	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18979	hp2	a0001	c0001	t0004	g0016	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18980	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18982	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18982	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18983	hp1	a0001	c0001	t0002	g0010	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18983	hp2	a0001	c0001	t0003	g0061	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18984	hp1	a0001	c0001	t0004	g0007	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18984	hp2	a0001	c0001	t0002	g0022	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18988	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18988	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18989	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18989	hp2	a0001	c0001	t0001	g0024	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18990	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18991	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18991	hp2	a0001	c0001	t0001	g0014	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18992	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18994	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18995	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18997	hp1	a0001	c0001	t0003	g0004	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18997	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18998	hp1	a0001	c0001	t0001	g0008	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18998	hp2	a0001	c0001	t0003	g0004	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19000	hp1	a0001	c0001	t0004	g0007	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19002	hp2	a0001	c0001	t0009	g0035	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19004	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19005	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19007	hp1	a0001	c0001	t0004	g0007	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19009	hp2	a0001	c0001	t0003	g0019	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19011	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19011	hp2	a0001	c0001	t0003	g0019	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19012	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19012	hp2	a0001	c0001	t0004	g0007	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19030	hp1	a0001	c0001	t0002	g0002	AFR	LWK	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19030	hp2	a0001	c0001	t0001	g0020	AFR	LWK	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19043	hp1	a0001	c0001	t0001	g0015	AFR	LWK	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19043	hp2	a0001	c0001	t0005	g0041	AFR	LWK	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19055	hp1	a0001	c0001	t0001	g0011	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19055	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19057	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19060	hp2	a0003	c0004	t0004	g0052	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19062	hp1	a0001	c0001	t0001	g0011	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19062	hp2	a0001	c0001	t0004	g0007	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19064	hp1	a0001	c0001	t0003	g0004	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19065	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19065	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19066	hp1	a0001	c0001	t0004	g0046	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19066	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19068	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19068	hp2	a0001	c0001	t0001	g0025	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19070	hp2	a0001	c0001	t0001	g0064	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19074	hp2	a0001	c0001	t0001	g0024	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19076	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19076	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19079	hp1	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19079	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19080	hp2	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19081	hp2	a0001	c0001	t0002	g0022	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19082	hp1	a0001	c0001	t0003	g0004	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19082	hp2	a0001	c0001	t0002	g0028	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19083	hp1	a0001	c0001	t0004	g0026	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19083	hp2	a0001	c0001	t0005	g0022	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19084	hp1	a0001	c0001	t0009	g0035	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19084	hp2	a0001	c0001	t0003	g0019	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19085	hp1	a0001	c0001	t0002	g0002	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19086	hp2	a0001	c0001	t0004	g0016	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19088	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19090	hp2	a0001	c0001	t0004	g0007	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19091	hp1	a0001	c0001	t0004	g0016	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19091	hp2	a0001	c0001	t0001	g0003	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19240	hp1	a0001	c0001	t0005	g0013	AFR	YRI	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA19240	hp2	a0001	c0001	t0006	g0027	AFR	YRI	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA20129	hp1	a0001	c0001	t0001	g0005	AFR	ASW	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA20129	hp2	a0001	c0001	t0001	g0054	AFR	ASW	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA20752	hp1	a0001	c0001	t0002	g0009	EUR	TSI	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA20752	hp2	a0001	c0001	t0001	g0008	EUR	TSI	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA20805	hp1	a0001	c0001	t0001	g0003	EUR	TSI	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA20805	hp2	a0001	c0001	t0001	g0006	EUR	TSI	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA20905	hp1	a0001	c0001	t0001	g0006	SAS	GIH	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA20905	hp2	a0001	c0001	t0002	g0009	SAS	GIH	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01123	hp1	a0001	c0001	t0001	g0003	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG01123	hp2	a0001	c0001	t0001	g0014	AMR	CLM	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02486	hp1	a0001	c0001	t0001	g0005	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02486	hp2	a0001	c0001	t0001	g0023	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02559	hp1	a0001	c0001	t0001	g0006	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG02559	hp2	a0001	c0001	t0005	g0002	AFR	ACB	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03471	hp1	a0001	c0001	t0005	g0028	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG03471	hp2	a0001	c0001	t0001	g0005	AFR	MSL	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG06807	hp1	a0001	c0001	t0001	g0031	AFR	USA	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
HG06807	hp2	a0001	c0001	t0001	g0003	AFR	USA	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18955	hp1	a0001	c0001	t0004	g0026	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA18955	hp2	a0001	c0001	t0001	g0001	EAS	JPT	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA20300	hp1	a0001	c0001	t0001	g0018	AFR	USA	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA20300	hp2	a0001	c0001	t0001	g0017	AFR	USA	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA21309	hp1	a0002	c0003	t0001	g0071	AFR	LWK	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
NA21309	hp2	a0001	c0001	t0002	g0058	AFR	LWK	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0014	REF	REF	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0003	REF	REF	SPEF1_chr20_3772504_3786448	SPEF1	chr20	3772504	3786448

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr20:3778297	C C	A A	1	a0003 a0003	1	NA19060.hp2 NA19060.hp2	missense_variant	MODERATE	c.626G>T c.626G>T	p.Arg209Leu p.Arg209Leu	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	7/7	787/1580	626/711	209/236			chr20	3778297
chr20:3778792	C C	T T	1	a0002 a0002	9	HG02145.hp2 HG02630.hp1 HG02647.hp2 others(6): Show HG02145.hp2 HG02630.hp1 HG02647.hp2 HG02723.hp2 HG02818.hp2 HG02965.hp1 HG03225.hp1 HG03486.hp2 NA21309.hp1	missense_variant	MODERATE	c.433G>A c.433G>A	p.Ala145Thr p.Ala145Thr	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	5/7	594/1580	433/711	145/236			chr20	3778792

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr20:3781201	G G	A A	1	a0002c0003 a0002c0003	3	HG02630.hp1 HG02723.hp2 NA21309.hp1 HG02630.hp1 HG02723.hp2 NA21309.hp1	synonymous_variant	LOW	c.87C>T c.87C>T	p.Leu29Leu p.Leu29Leu	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/7	248/1580	87/711	29/236			chr20	3781201

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr20:3777537	T T	A A	1	a0001c0001t0003 a0001c0001t0003	31	HG00558.hp2 HG01256.hp1 HG01258.hp2 others(28): Show HG00558.hp2 HG01256.hp1 HG01258.hp2 HG01346.hp2 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG02004.hp2 HG02080.hp1 HG02148.hp2 HG02155.hp1 HG03491.hp2 HG03492.hp1 HG03831.hp2 HG04184.hp2 NA18944.hp2 NA18945.hp1 NA18947.hp2 NA18950.hp2 NA18968.hp2 NA18979.hp1 NA18983.hp2 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA19009.hp2 NA19011.hp2 NA19064.hp1 NA19082.hp1 NA19084.hp2	3_prime_UTR_variant	MODIFIER	c.675A>T c.675A>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	7/7	675	chr20	3777537
chr20:3777615	G G	A A	1	a0002c0002t0010 a0002c0002t0010	1	HG02647.hp2 HG02647.hp2	3_prime_UTR_variant	MODIFIER	c.597C>T c.597C>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	7/7	597	chr20	3777615
chr20:3777779	C C	G G	3	a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0001t0002 a0001c0001t0005 a0001c0001t0008	108	HG00140.hp2 HG00323.hp1 HG00408.hp1 others(105): Show HG00140.hp2 HG00323.hp1 HG00408.hp1 HG00558.hp1 HG00609.hp2 HG00621.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp2 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01361.hp2 HG01496.hp2 HG01516.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01975.hp2 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02027.hp1 HG02040.hp1 HG02074.hp2 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02738.hp1 HG02738.hp2 HG02886.hp2 HG02922.hp2 HG02976.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03516.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG04115.hp1 HG04199.hp1 NA18522.hp2 NA18906.hp2 NA18942.hp1 NA18944.hp1 NA18948.hp1 NA18953.hp2 NA18954.hp2 NA18956.hp1 NA18957.hp2 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18974.hp2 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp2 NA18988.hp2 NA18989.hp1 NA18991.hp1 NA19005.hp1 NA19011.hp1 NA19030.hp1 NA19043.hp2 NA19057.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19076.hp2 NA19079.hp2 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19083.hp2 NA19085.hp1 NA19240.hp1 NA20752.hp1 NA20905.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.433G>C c.433G>C	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	7/7	433	chr20	3777779
chr20:3777994	T T	C C	2	a0001c0001t0004 a0003c0004t0004 a0001c0001t0004 a0003c0004t0004	29	HG00423.hp2 HG00621.hp2 HG02074.hp1 others(26): Show HG00423.hp2 HG00621.hp2 HG02074.hp1 HG02080.hp2 HG02083.hp1 HG02129.hp1 HG03017.hp2 HG03927.hp1 NA18747.hp1 NA18951.hp2 NA18952.hp2 NA18955.hp1 NA18959.hp1 NA18960.hp1 NA18964.hp1 NA18969.hp1 NA18973.hp2 NA18979.hp2 NA18984.hp1 NA19000.hp1 NA19007.hp1 NA19012.hp2 NA19060.hp2 NA19062.hp2 NA19066.hp1 NA19083.hp1 NA19086.hp2 NA19090.hp2 NA19091.hp1	3_prime_UTR_variant	MODIFIER	c.218A>G c.218A>G	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	7/7	218	chr20	3777994
chr20:3778196	C C	T T	1	a0001c0001t0007 a0001c0001t0007	3	HG01243.hp2 HG01884.hp1 HG03516.hp2 HG01243.hp2 HG01884.hp1 HG03516.hp2	3_prime_UTR_variant	MODIFIER	c.16G>A c.16G>A	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	7/7	16	chr20	3778196
chr20:3781290	G G	A A	1	a0001c0001t0008 a0001c0001t0008	3	HG00733.hp2 HG01168.hp2 HG01169.hp1 HG00733.hp2 HG01168.hp2 HG01169.hp1	5_prime_UTR_variant	MODIFIER	c.-3C>T c.-3C>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/7	3	chr20	3781290
chr20:3781291	C C	A A	1	a0001c0001t0008 a0001c0001t0008	3	HG00733.hp2 HG01168.hp2 HG01169.hp1 HG00733.hp2 HG01168.hp2 HG01169.hp1	5_prime_UTR_variant	MODIFIER	c.-4G>T c.-4G>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/7	4	chr20	3781291
chr20:3781446	T T	C C	1	a0001c0001t0009 a0001c0001t0009	2	NA19002.hp2 NA19084.hp1 NA19002.hp2 NA19084.hp1	5_prime_UTR_variant	MODIFIER	c.-159A>G c.-159A>G	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/7	159	chr20	3781446
chr20:3781448	T T	C C	3	a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 a0001c0001t0002 a0001c0001t0006 a0001c0001t0008	85	HG00140.hp2 HG00323.hp1 HG00408.hp1 others(82): Show HG00140.hp2 HG00323.hp1 HG00408.hp1 HG00558.hp1 HG00609.hp2 HG00621.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01169.hp1 HG01243.hp1 HG01361.hp2 HG01496.hp2 HG01516.hp1 HG01517.hp2 HG01934.hp1 HG01975.hp2 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02027.hp1 HG02040.hp1 HG02074.hp2 HG02300.hp1 HG02615.hp2 HG02622.hp1 HG02698.hp1 HG02698.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp2 HG02922.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp2 HG04115.hp1 HG04199.hp1 NA18942.hp1 NA18944.hp1 NA18948.hp1 NA18953.hp2 NA18954.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp2 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18974.hp2 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp2 NA18988.hp2 NA18989.hp1 NA18991.hp1 NA19005.hp1 NA19011.hp1 NA19030.hp1 NA19057.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19076.hp2 NA19079.hp2 NA19080.hp2 NA19081.hp2 NA19082.hp2 NA19085.hp1 NA19240.hp2 NA20752.hp1 NA20905.hp2 NA21309.hp2	5_prime_UTR_variant	MODIFIER	c.-161A>G c.-161A>G	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/7	161	chr20	3781448

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr20:3778553	G G	A A	36	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0014 others(33): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0032 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0067 a0001c0001t0002g0002 a0001c0001t0002g0010 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0028 a0001c0001t0002g0055 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0062 a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0005g0002 a0001c0001t0005g0012 a0001c0001t0005g0013 a0001c0001t0005g0021 a0001c0001t0005g0022 a0001c0001t0005g0028 a0001c0001t0005g0041 a0001c0001t0005g0049 a0001c0001t0005g0070 a0001c0001t0006g0057 a0001c0001t0008g0030 a0001c0001t0009g0035	209	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(206): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01258.hp1 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02074.hp2 HG02129.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02886.hp2 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03209.hp1 HG03225.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03491.hp1 HG03516.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03831.hp1 HG03942.hp1 HG04199.hp1 HG04204.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18994.hp1 NA18995.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp1 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19055.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19062.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19076.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19240.hp1 NA20300.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.480-9C>T c.480-9C>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	5/6	chr20	3778553
chr20:3778598	CTT CTT	C C	4	a0001c0001t0001g0020 a0001c0001t0005g0013 a0001c0001t0005g0049 others(1): Show a0001c0001t0001g0020 a0001c0001t0005g0013 a0001c0001t0005g0049 a0001c0001t0005g0070	11	HG02451.hp2 HG02615.hp1 HG02723.hp1 others(8): Show HG02451.hp2 HG02615.hp1 HG02723.hp1 HG02970.hp1 HG03098.hp1 HG03486.hp1 HG03516.hp1 NA18522.hp2 NA18906.hp2 NA19030.hp2 NA19240.hp1	intron_variant	MODIFIER	c.480-56_480-55delAA c.480-56_480-55delAA	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	5/6	chr20	3778598
chr20:3778601	C C	A A	4	a0001c0001t0001g0020 a0001c0001t0005g0013 a0001c0001t0005g0049 others(1): Show a0001c0001t0001g0020 a0001c0001t0005g0013 a0001c0001t0005g0049 a0001c0001t0005g0070	11	HG02451.hp2 HG02615.hp1 HG02723.hp1 others(8): Show HG02451.hp2 HG02615.hp1 HG02723.hp1 HG02970.hp1 HG03098.hp1 HG03486.hp1 HG03516.hp1 NA18522.hp2 NA18906.hp2 NA19030.hp2 NA19240.hp1	intron_variant	MODIFIER	c.480-57G>T c.480-57G>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	5/6	chr20	3778601
chr20:3778602	C C	G G	4	a0001c0001t0001g0020 a0001c0001t0005g0013 a0001c0001t0005g0049 others(1): Show a0001c0001t0001g0020 a0001c0001t0005g0013 a0001c0001t0005g0049 a0001c0001t0005g0070	11	HG02451.hp2 HG02615.hp1 HG02723.hp1 others(8): Show HG02451.hp2 HG02615.hp1 HG02723.hp1 HG02970.hp1 HG03098.hp1 HG03486.hp1 HG03516.hp1 NA18522.hp2 NA18906.hp2 NA19030.hp2 NA19240.hp1	intron_variant	MODIFIER	c.480-58G>C c.480-58G>C	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	5/6	chr20	3778602
chr20:3778604	G G	A A	4	a0001c0001t0001g0020 a0001c0001t0005g0013 a0001c0001t0005g0049 others(1): Show a0001c0001t0001g0020 a0001c0001t0005g0013 a0001c0001t0005g0049 a0001c0001t0005g0070	11	HG02451.hp2 HG02615.hp1 HG02723.hp1 others(8): Show HG02451.hp2 HG02615.hp1 HG02723.hp1 HG02970.hp1 HG03098.hp1 HG03486.hp1 HG03516.hp1 NA18522.hp2 NA18906.hp2 NA19030.hp2 NA19240.hp1	intron_variant	MODIFIER	c.480-60C>T c.480-60C>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	5/6	chr20	3778604
chr20:3778881	C C	T T	33	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0014 others(30): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0002g0002 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0028 a0001c0001t0002g0055 a0001c0001t0002g0059 a0001c0001t0002g0062 a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0005g0002 a0001c0001t0005g0009 a0001c0001t0005g0012 a0001c0001t0005g0013 a0001c0001t0005g0021 a0001c0001t0005g0022 a0001c0001t0005g0028 a0001c0001t0005g0049 a0001c0001t0005g0070 a0001c0001t0006g0057 a0001c0001t0008g0030 a0001c0001t0009g0035	208	HG00140.hp2 HG00323.hp1 HG00408.hp1 others(205): Show HG00140.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01258.hp1 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02056.hp1 HG02056.hp2 HG02074.hp2 HG02129.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02738.hp1 HG02738.hp2 HG02886.hp2 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03209.hp1 HG03225.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03491.hp1 HG03516.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03831.hp1 HG03942.hp1 HG04115.hp1 HG04199.hp1 HG04204.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18974.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18994.hp1 NA18995.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp1 NA19011.hp1 NA19030.hp1 NA19030.hp2 NA19055.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19062.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19076.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19240.hp1 NA20752.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.418+70G>A c.418+70G>A	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	4/6	chr20	3778881
chr20:3779023	G G	A A	1	a0001c0001t0001g0054 a0001c0001t0001g0054	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.379-33C>T c.379-33C>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	3/6	chr20	3779023
chr20:3779103	C C	A A	1	a0001c0001t0002g0059 a0001c0001t0002g0059	1	HG02738.hp1 HG02738.hp1	intron_variant	MODIFIER	c.378+93G>T c.378+93G>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	3/6	chr20	3779103
chr20:3779449	T T	A A	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	HG00597.hp2 HG00597.hp2	intron_variant	MODIFIER	c.222-97A>T c.222-97A>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	2/6	chr20	3779449
chr20:3779898	T T	G G	2	a0001c0001t0001g0038 a0001c0001t0007g0068 a0001c0001t0001g0038 a0001c0001t0007g0068	2	HG02145.hp1 HG03516.hp2 HG02145.hp1 HG03516.hp2	intron_variant	MODIFIER	c.110-123A>C c.110-123A>C	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3779898
chr20:3779901	G G	A A	59	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(56): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0048 a0001c0001t0001g0054 a0001c0001t0001g0067 a0001c0001t0002g0002 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0028 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0062 a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0003g0004 a0001c0001t0003g0019 a0001c0001t0003g0063 a0001c0001t0005g0002 a0001c0001t0005g0009 a0001c0001t0005g0012 a0001c0001t0005g0013 a0001c0001t0005g0021 a0001c0001t0005g0022 a0001c0001t0005g0028 a0001c0001t0005g0041 a0001c0001t0005g0049 a0001c0001t0005g0070 a0001c0001t0006g0027 a0001c0001t0006g0057 a0001c0001t0007g0033 a0001c0001t0007g0068 a0001c0001t0008g0030 a0001c0001t0009g0035 a0002c0002t0001g0029 a0002c0002t0001g0053 a0002c0002t0001g0060 a0002c0002t0010g0047 a0002c0003t0001g0034 a0002c0003t0001g0071	317	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(314): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp2 HG02080.hp1 HG02129.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02698.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp2 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp2 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18974.hp2 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp2 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19076.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.110-126C>T c.110-126C>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3779901
chr20:3780109	G G	A A	1	a0001c0001t0001g0048 a0001c0001t0001g0048	1	HG02897.hp2 HG02897.hp2	intron_variant	MODIFIER	c.110-334C>T c.110-334C>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780109
chr20:3780109	G G	T T	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	NA18951.hp1 NA18951.hp1	intron_variant	MODIFIER	c.110-334C>A c.110-334C>A	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780109
chr20:3780163	C C	A A	2	a0002c0003t0001g0034 a0002c0003t0001g0071 a0002c0003t0001g0034 a0002c0003t0001g0071	3	HG02630.hp1 HG02723.hp2 NA21309.hp1 HG02630.hp1 HG02723.hp2 NA21309.hp1	intron_variant	MODIFIER	c.110-388G>T c.110-388G>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780163
chr20:3780216	C C	T T	1	a0002c0003t0001g0071 a0002c0003t0001g0071	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.110-441G>A c.110-441G>A	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780216
chr20:3780251	T T	G G	2	a0002c0003t0001g0034 a0002c0003t0001g0071 a0002c0003t0001g0034 a0002c0003t0001g0071	3	HG02630.hp1 HG02723.hp2 NA21309.hp1 HG02630.hp1 HG02723.hp2 NA21309.hp1	intron_variant	MODIFIER	c.110-476A>C c.110-476A>C	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780251
chr20:3780312	C C	CGACAAGA others(1): Show CGACAAGAG	1	a0001c0001t0001g0017 a0001c0001t0001g0017	5	HG00099.hp2 HG00140.hp1 HG00642.hp2 others(2): Show HG00099.hp2 HG00140.hp1 HG00642.hp2 HG03654.hp2 NA20300.hp2	intron_variant	MODIFIER	c.110-545_110-538dup others(8): Show c.110-545_110-538dupCTCTTGTC	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780312
chr20:3780334	C C	CA CA	34	a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 others(31): Show a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0056 a0001c0001t0002g0002 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0021 a0001c0001t0002g0055 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0069 a0001c0001t0003g0004 a0001c0001t0003g0019 a0001c0001t0003g0063 a0001c0001t0004g0026 a0001c0001t0005g0002 a0001c0001t0005g0009 a0001c0001t0005g0012 a0001c0001t0005g0013 a0001c0001t0005g0021 a0001c0001t0005g0049 a0001c0001t0005g0070 a0001c0001t0006g0027 a0001c0001t0006g0057 a0001c0001t0008g0030 a0001c0001t0009g0035	238	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(235): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02056.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp2 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02738.hp1 HG02738.hp2 HG02886.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp2 HG03239.hp2 HG03486.hp1 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp2 NA18964.hp2 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18974.hp2 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19076.hp2 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.110-560dupT c.110-560dupT	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780334
chr20:3780334	C C	CAA CAA	5	a0001c0001t0001g0025 a0001c0001t0001g0037 a0001c0001t0001g0038 others(2): Show a0001c0001t0001g0025 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0002g0028 a0001c0001t0005g0028	8	HG00673.hp2 HG02056.hp2 HG02145.hp1 others(5): Show HG00673.hp2 HG02056.hp2 HG02145.hp1 HG02622.hp1 HG03471.hp1 HG03540.hp1 NA19068.hp2 NA19082.hp2	intron_variant	MODIFIER	c.110-561_110-560dup others(2): Show c.110-561_110-560dupTT	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780334
chr20:3780334	CA CA	C C	6	a0001c0001t0001g0008 a0001c0001t0001g0031 a0001c0001t0004g0050 others(3): Show a0001c0001t0001g0008 a0001c0001t0001g0031 a0001c0001t0004g0050 a0002c0002t0001g0060 a0002c0003t0001g0034 a0002c0003t0001g0071	16	HG01106.hp1 HG02602.hp1 HG02630.hp1 others(13): Show HG01106.hp1 HG02602.hp1 HG02630.hp1 HG02723.hp2 HG02735.hp2 HG03225.hp1 HG03490.hp2 HG03492.hp2 HG03704.hp2 HG04199.hp2 HG04228.hp2 HG06807.hp1 NA18969.hp1 NA18998.hp1 NA20752.hp2 NA21309.hp1	intron_variant	MODIFIER	c.110-560delT c.110-560delT	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780334
chr20:3780416	G G	GCA GCA	10	a0001c0001t0001g0017 a0001c0001t0001g0023 a0001c0001t0002g0010 others(7): Show a0001c0001t0001g0017 a0001c0001t0001g0023 a0001c0001t0002g0010 a0001c0001t0002g0062 a0001c0001t0003g0061 a0001c0001t0003g0063 a0001c0001t0004g0016 a0002c0002t0001g0029 a0002c0002t0001g0060 a0002c0003t0001g0071	30	HG00099.hp2 HG00140.hp1 HG00642.hp2 others(27): Show HG00099.hp2 HG00140.hp1 HG00642.hp2 HG00735.hp2 HG00741.hp2 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG01978.hp1 HG02486.hp2 HG02683.hp1 HG02698.hp1 HG02818.hp2 HG02965.hp1 HG03225.hp1 HG03225.hp2 HG03486.hp2 HG03654.hp2 HG03688.hp1 HG04199.hp1 NA18747.hp1 NA18964.hp1 NA18979.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA19086.hp2 NA19091.hp1 NA20300.hp2 NA21309.hp1	intron_variant	MODIFIER	c.110-643_110-642dup others(2): Show c.110-643_110-642dupTG	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780416
chr20:3780416	G G	GCACA GCACA	7	a0001c0001t0001g0064 a0001c0001t0001g0067 a0001c0001t0002g0066 others(4): Show a0001c0001t0001g0064 a0001c0001t0001g0067 a0001c0001t0002g0066 a0001c0001t0002g0069 a0001c0001t0004g0065 a0001c0001t0007g0033 a0001c0001t0007g0068	8	HG01243.hp2 HG01884.hp1 HG02040.hp1 others(5): Show HG01243.hp2 HG01884.hp1 HG02040.hp1 HG02738.hp2 HG02809.hp1 HG03516.hp2 NA18951.hp2 NA19070.hp2	intron_variant	MODIFIER	c.110-645_110-642dup others(4): Show c.110-645_110-642dupTGTG	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780416
chr20:3780416	GCA GCA	G G	9	a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0015 others(6): Show a0001c0001t0001g0005 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0048 a0001c0001t0002g0021 a0001c0001t0004g0046 a0001c0001t0005g0021 a0001c0001t0005g0049 a0002c0002t0010g0047	38	HG00738.hp1 HG01109.hp2 HG01123.hp2 others(35): Show HG00738.hp1 HG01109.hp2 HG01123.hp2 HG01361.hp1 HG01884.hp2 HG01891.hp2 HG02257.hp1 HG02258.hp2 HG02280.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03471.hp2 HG03942.hp2 NA18522.hp1 NA18971.hp2 NA18991.hp2 NA19043.hp1 NA19066.hp1 NA20129.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.110-643_110-642del others(2): Show c.110-643_110-642delTG	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780416
chr20:3780416	GCACA GCACA	G G	12	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0020 others(9): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0020 a0001c0001t0001g0025 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0003g0004 a0001c0001t0005g0012 a0001c0001t0005g0013 a0001c0001t0005g0070 a0001c0001t0009g0035	127	HG00408.hp2 HG00423.hp1 HG00438.hp1 others(124): Show HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00642.hp1 HG00673.hp2 HG00735.hp1 HG00738.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01099.hp2 HG01109.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01516.hp2 HG01517.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01981.hp1 HG02004.hp2 HG02027.hp2 HG02056.hp1 HG02056.hp2 HG02080.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02293.hp1 HG02300.hp2 HG02451.hp2 HG02602.hp2 HG02723.hp1 HG02970.hp1 HG03017.hp1 HG03041.hp2 HG03098.hp1 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp1 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03942.hp1 HG04184.hp2 HG04204.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp2 NA18943.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18953.hp1 NA18955.hp2 NA18956.hp2 NA18957.hp1 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18968.hp1 NA18969.hp2 NA18970.hp1 NA18980.hp1 NA18982.hp2 NA18990.hp2 NA18992.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp1 NA19030.hp2 NA19055.hp1 NA19057.hp1 NA19060.hp1 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19068.hp2 NA19070.hp1 NA19074.hp1 NA19080.hp1 NA19081.hp1 NA19082.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19240.hp1	intron_variant	MODIFIER	c.110-645_110-642del others(4): Show c.110-645_110-642delTGTG	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780416
chr20:3780416	GCACACA GCACACA	G G	2	a0001c0001t0001g0024 a0001c0001t0003g0019 a0001c0001t0001g0024 a0001c0001t0003g0019	7	NA18968.hp2 NA18974.hp1 NA18989.hp2 others(4): Show NA18968.hp2 NA18974.hp1 NA18989.hp2 NA19009.hp2 NA19011.hp2 NA19074.hp2 NA19084.hp2	intron_variant	MODIFIER	c.110-647_110-642del others(6): Show c.110-647_110-642delTGTGTG	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780416
chr20:3780416	GCACACAC others(1): Show GCACACACA	G G	3	a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0005g0041 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0005g0041	3	HG02129.hp2 HG03453.hp1 NA19043.hp2 HG02129.hp2 HG03453.hp1 NA19043.hp2	intron_variant	MODIFIER	c.110-649_110-642del others(8): Show c.110-649_110-642delTGTGTGTG	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780416
chr20:3780416	GCACACAC others(11): Show GCACACACACACACACACA	G G	1	a0001c0001t0001g0039 a0001c0001t0001g0039	1	HG01258.hp1 HG01258.hp1	intron_variant	MODIFIER	c.110-659_110-642del others(18): Show c.110-659_110-642delTGTGTGTGTGTGTGTGTG	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780416
chr20:3780634	C C	T T	2	a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0037 a0001c0001t0001g0038	2	HG02145.hp1 HG03540.hp1 HG02145.hp1 HG03540.hp1	intron_variant	MODIFIER	c.109+545G>A c.109+545G>A	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780634
chr20:3780726	G G	A A	1	a0001c0001t0005g0070 a0001c0001t0005g0070	1	NA18906.hp2 NA18906.hp2	intron_variant	MODIFIER	c.109+453C>T c.109+453C>T	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780726
chr20:3780941	A A	G G	1	a0001c0001t0001g0036 a0001c0001t0001g0036	1	HG02735.hp1 HG02735.hp1	intron_variant	MODIFIER	c.109+238T>C c.109+238T>C	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3780941
chr20:3781126	C C	T T	1	a0001c0001t0001g0018 a0001c0001t0001g0018	4	HG01074.hp2 HG01358.hp1 HG02148.hp1 others(1): Show HG01074.hp2 HG01358.hp1 HG02148.hp1 NA20300.hp1	intron_variant	MODIFIER	c.109+53G>A c.109+53G>A	SPEF1	ENSG00000101222.12	transcript	ENST00000379756.3	protein_coding	1/6	chr20	3781126

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 3)

CCoding Level Haplotype Info (Total: 4)

TTranscript Level Haplotype Info (Total: 10)

GGenebody Level Haplotype Info (Total: 71)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 4)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 13)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 76)

Haplotype Details by Sample (Haploid Level) (Total: 418)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 2)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 9)

GGenebody Level Haplotype Variants (Intron) (Total: 31)

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Annotation (Repeats)

Annotation (SNP Array)