view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLK_chr10_103962140_104034233 | 103966431 | A | AAAAAAAA others(2): Show |
upstream_gene_variant | MODIFIER | HG01884.hp1 HG02145.hp2 HG02717.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0023a0001c0001t0024 | a0001c0001t0007g0104 a0001c0001t0007g0105 a0001c0001t0007g0107 others(3): Show |
6 | 108 | 0.0556 | 9 | c.-13 others(20): Show |
SLK | ENSG00000065613.15 | transcript | ENST00000369755.4 | protein_coding | 708 | chr10 | TogoVar | |||||||
SLK_chr10_103962140_104034233 | 103966431 | A | AAAAAGAA others(2): Show |
upstream_gene_variant | MODIFIER | HG00280.hp2 HG00621.hp2 HG00673.hp1 others(57): Show |
a0001a0003a0008others(1): Show | a0001c0011a0003c0003a0003c0012others(3): Show | a0001c0011t0006a0003c0003t0003a0003c0003t0010others(7): Show | a0001c0011t0006g0174 a0001c0011t0006g0175 a0003c0003t0003g0001 others(42): Show |
60 | 162 | 0.3704 | 9 | c.-13 others(20): Show |
SLK | ENSG00000065613.15 | transcript | ENST00000369755.4 | protein_coding | 708 | chr10 | TogoVar | |||||||
SLK_chr10_103962140_104034233 | 103974614 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00673.hp2 HG01071.hp2 HG02559.hp2 others(6): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0001a0001c0001t0008a0004c0005t0005 | a0001c0001t0001g0214 a0001c0001t0001g0218 a0001c0001t0001g0285 others(5): Show |
9 | 48 | 0.1875 | 9 | c.150 others(26): Show |
SLK | ENSG00000065613.15 | transcript | ENST00000369755.4 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SLK_chr10_103962140_104034233 | 103989464 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG02647.hp2 HG02896.hp1 HG02897.hp1 others(3): Show |
a0002 | a0002c0002 | a0002c0002t0005 | a0002c0002t0005g0010 a0002c0002t0005g0149 a0002c0002t0005g0150 others(2): Show |
6 | 23 | 0.2609 | 9 | c.151 others(26): Show |
SLK | ENSG00000065613.15 | transcript | ENST00000369755.4 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SLMAP_chr3_57751309_57935003 | 57774509 | A | AATTATTA others(2): Show |
intron_variant | MODIFIER | HG02451.hp2 HG02809.hp2 HG02886.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0010 | a0001c0001t0003g0167 a0001c0001t0010g0301 a0001c0001t0010g0302 others(1): Show |
4 | 32 | 0.1250 | 9 | c.198 others(28): Show |
SLMAP | ENSG00000163681.17 | transcript | ENST00000671191.1 | protein_coding | 2/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SLMAP_chr3_57751309_57935003 | 57906310 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00438.hp2 HG00621.hp2 HG01978.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001a0001c0002t0008 | a0001c0001t0001g0122 a0001c0001t0001g0289 a0001c0002t0001g0212 others(10): Show |
13 | 132 | 0.0985 | 9 | c.150 others(28): Show |
SLMAP | ENSG00000163681.17 | transcript | ENST00000671191.1 | protein_coding | 17/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44941008 | G | GCTTTTGA others(2): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(128): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0003others(2): Show | a0001c0001t0001a0002c0002t0001a0003c0003t0001others(2): Show | a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0032 others(95): Show |
131 | 332 | 0.3946 | 9 | c.129 others(24): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
SMAD2_chr18_47803957_47935659 | 47813711 | A | ATTTTTTT others(2): Show |
3_prime_UTR_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG00558.hp1 others(53): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006a0001c0001t0017others(37): Show | a0001c0001t0001g0195 a0001c0001t0001g0197 a0001c0001t0001g0204 others(53): Show |
56 | 61 | 0.9180 | 9 | c.*28 others(22): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 11/11 | 28115 | chr18 | TogoVar | ||||||
SMAD2_chr18_47803957_47935659 | 47850451 | T | TTATATAT others(2): Show |
intron_variant | MODIFIER | HG01109.hp1 HG01257.hp1 HG01261.hp2 others(21): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0007others(18): Show | a0001c0001t0003g0148 a0001c0001t0003g0169 a0001c0001t0004g0126 others(21): Show |
24 | 298 | 0.0805 | 9 | c.784 others(24): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 7/10 | chr18 | TogoVar | |||||||
SMAD2_chr18_47803957_47935659 | 47850462 | A | ATATATTA others(2): Show |
intron_variant | MODIFIER | HG01069.hp2 HG01978.hp1 HG02055.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(7): Show | a0001c0001t0001g0273 a0001c0001t0001g0275 a0001c0001t0004g0131 others(10): Show |
13 | 155 | 0.0839 | 9 | c.784 others(24): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 7/10 | chr18 | TogoVar | |||||||
SMAD2_chr18_47803957_47935659 | 47850787 | T | TTATATAT others(2): Show |
intron_variant | MODIFIER | HG02258.hp2 HG02486.hp2 HG03471.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0072a0001c0001t0123a0001c0001t0182others(1): Show | a0001c0001t0072g0216 a0001c0001t0123g0301 a0001c0001t0182g0214 others(1): Show |
4 | 201 | 0.0199 | 9 | c.784 others(24): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 7/10 | chr18 | TogoVar | |||||||
SMAD2_chr18_47803957_47935659 | 47850849 | T | TTATATAT others(2): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00323.hp2 others(161): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(126): Show | a0001c0001t0001g0197 a0001c0001t0001g0252 a0001c0001t0001g0258 others(160): Show |
164 | 256 | 0.6406 | 9 | c.784 others(24): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 7/10 | chr18 | TogoVar | |||||||
SMAD2_chr18_47803957_47935659 | 47882041 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG02055.hp2 HG02293.hp1 HG03139.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0021a0001c0001t0067a0001c0001t0068others(5): Show | a0001c0001t0021g0205 a0001c0001t0067g0119 a0001c0001t0068g0122 others(5): Show |
8 | 47 | 0.1702 | 9 | c.237 others(28): Show |
SMAD2 | ENSG00000175387.16 | transcript | ENST00000262160.11 | protein_coding | 2/10 | chr18 | TogoVar | |||||||
SMAD3_chr15_67060602_67200169 | 67112154 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00438.hp1 HG00621.hp2 HG00673.hp1 others(27): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0088 a0001c0001t0001g0134 a0001c0001t0001g0178 others(27): Show |
30 | 40 | 0.7500 | 9 | c.206 others(28): Show |
SMAD3 | ENSG00000166949.17 | transcript | ENST00000327367.9 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SMAD9_chr13_36839831_36925238 | 36861552 | G | GCAGAACT others(2): Show |
intron_variant | MODIFIER | HG01109.hp1 HG01243.hp1 HG02055.hp1 others(6): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0012a0001c0001t0033a0001c0001t0055others(1): Show | a0001c0001t0012g0172 a0001c0001t0012g0181 a0001c0001t0012g0186 others(6): Show |
9 | 356 | 0.0253 | 9 | c.100 others(28): Show |
SMAD9 | ENSG00000120693.15 | transcript | ENST00000379826.5 | protein_coding | 5/6 | chr13 | TogoVar | |||||||
SMAP1_chr6_70662883_70867003 | 70680102 | T | TCAACAAC others(2): Show |
intron_variant | MODIFIER | HG02818.hp1 HG03704.hp1 HG03942.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0014 | a0001c0001t0001g0126 a0001c0001t0001g0132 a0001c0001t0001g0133 others(5): Show |
8 | 182 | 0.0440 | 9 | c.118 others(28): Show |
SMAP1 | ENSG00000112305.15 | transcript | ENST00000370455.8 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SMARCA1_chrX_129441506_129528490 | 129504549 | T | TAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG01081.hp1 HG01243.hp1 HG02257.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0081 a0001c0001t0001g0082 others(1): Show |
6 | 82 | 0.0732 | 9 | c.116 others(26): Show |
SMARCA1 | ENSG00000102038.16 | transcript | ENST00000371121.5 | protein_coding | 9/24 | chrX | TogoVar | |||||||
SMARCA2_chr9_2010347_2198620 | 2039776 | A | ACAGCAGC others(2): Show |
disruptive_inframe_insertion | MODERATE | HG02723.hp2 HG02735.hp2 HG04184.hp1 others(2): Show |
a0007 | a0007c0015a0007c0064 | a0007c0015t0001a0007c0015t0002a0007c0064t0002 | a0007c0015t0001g0183 a0007c0015t0001g0237 a0007c0015t0002g0275 others(2): Show |
5 | 188 | 0.0266 | 9 | c.699 others(16): Show |
p.Gln others(13): Show |
SMARCA2 | ENSG00000080503.25 | transcript | ENST00000349721.8 | protein_coding | 4/34 | 802/5748 | 708/4773 | 236/1590 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||
SMARCA4_chr19_10956030_11067273 | 10960674 | G | GCCGCCGC others(2): Show |
upstream_gene_variant | MODIFIER | HG00099.hp1 HG00438.hp1 HG00558.hp1 others(88): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(11): Show | a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 others(88): Show |
91 | 284 | 0.3204 | 9 | c.-53 others(18): Show |
SMARCA4 | ENSG00000127616.22 | transcript | ENST00000344626.10 | protein_coding | 355 | chr19 | TogoVar | |||||||
SMARCB1_chr22_23781966_23843009 | 23833043 | C | CAAGTGTG others(2): Show |
intron_variant | MODIFIER | HG00280.hp2 NA18940.hp1 NA18947.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0045 | a0001c0001t0004g0048 a0001c0001t0004g0049 a0001c0001t0004g0055 others(6): Show |
9 | 361 | 0.0249 | 9 | c.987 others(24): Show |
SMARCB1 | ENSG00000099956.20 | transcript | ENST00000644036.2 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SMARCC1_chr3_47580269_47786893 | 47604699 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00738.hp1 HG01123.hp2 HG02145.hp1 others(13): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0060 a0001c0001t0001g0084 a0001c0001t0001g0100 others(13): Show |
16 | 36 | 0.4444 | 9 | c.304 others(28): Show |
SMARCC1 | ENSG00000173473.11 | transcript | ENST00000254480.10 | protein_coding | 26/27 | chr3 | TogoVar | |||||||
SMARCC1_chr3_47580269_47786893 | 47642592 | A | AAACAACA others(2): Show |
intron_variant | MODIFIER | NA18946.hp2 NA18956.hp2 NA18999.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0183 |
3 | 119 | 0.0252 | 9 | c.232 others(28): Show |
SMARCC1 | ENSG00000173473.11 | transcript | ENST00000254480.10 | protein_coding | 21/27 | chr3 | TogoVar | |||||||
SMARCC1_chr3_47580269_47786893 | 47671184 | A | ACAAACAA others(2): Show |
intron_variant | MODIFIER | HG02145.hp1 HG02922.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0180 a0001c0001t0001g0181 |
2 | 218 | 0.0092 | 9 | c.184 others(26): Show |
SMARCC1 | ENSG00000173473.11 | transcript | ENST00000254480.10 | protein_coding | 18/27 | chr3 | TogoVar | |||||||
SMARCD1_chr12_50080342_50105707 | 50086481 | G | GGTGGTGG others(2): Show |
intron_variant | MODIFIER | HG01109.hp1 HG02109.hp1 HG02630.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0028 a0001c0001t0001g0041 a0001c0001t0001g0095 others(8): Show |
13 | 364 | 0.0357 | 9 | c.366 others(24): Show |
SMARCD1 | ENSG00000066117.15 | transcript | ENST00000394963.9 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SMC1B_chr22_45339063_45418599 | 45386573 | A | AAACAACA others(2): Show |
intron_variant | MODIFIER | HG01175.hp1 HG02622.hp2 HG02970.hp2 others(3): Show |
a0004 | a0004c0005 | a0004c0005t0001 | a0004c0005t0001g0023 a0004c0005t0001g0186 a0004c0005t0001g0187 others(3): Show |
6 | 158 | 0.0380 | 9 | c.191 others(26): Show |
SMC1B | ENSG00000077935.17 | transcript | ENST00000357450.9 | protein_coding | 11/24 | chr22 | TogoVar | |||||||
SMC2_chr9_104089309_104146419 | 104134593 | T | TATATTAT others(2): Show |
intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00323.hp2 others(160): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0007others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(25): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(103): Show |
163 | 276 | 0.5906 | 9 | c.326 others(24): Show |
SMC2 | ENSG00000136824.19 | transcript | ENST00000374793.8 | protein_coding | 23/24 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SMC5_chr9_70253978_70359873 | 70359065 | A | AATTATTA others(2): Show |
downstream_gene_variant | MODIFIER | HG00099.hp1 HG00609.hp1 HG01081.hp2 others(21): Show |
a0003a0006a0014 | a0003c0003a0006c0011a0014c0018 | a0003c0003t0001a0003c0003t0008a0006c0011t0009others(1): Show | a0003c0003t0001g0004 a0003c0003t0001g0013 a0003c0003t0001g0014 others(17): Show |
24 | 34 | 0.7059 | 9 | c.*67 others(20): Show |
SMC5 | ENSG00000198887.9 | transcript | ENST00000361138.7 | protein_coding | 4193 | chr9 | TogoVar | |||||||
SMC6_chr2_17658812_17758810 | 17726087 | T | TAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00639.hp2 HG01071.hp2 HG01074.hp1 others(11): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0002a0002c0003t0001 | a0001c0001t0002g0200 a0001c0001t0002g0203 a0001c0001t0002g0205 others(11): Show |
14 | 84 | 0.1667 | 9 | c.624 others(24): Show |
SMC6 | ENSG00000163029.16 | transcript | ENST00000448223.7 | protein_coding | 8/27 | chr2 | TogoVar | |||||||
SMCHD1_chr18_2650726_2810017 | 2702308 | A | AAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00323.hp2 HG01070.hp1 HG01516.hp2 others(5): Show |
a0001a0002a0003 | a0001c0004a0002c0006a0003c0003others(1): Show | a0001c0004t0003a0002c0006t0001a0003c0003t0003others(1): Show | a0001c0004t0003g0106 a0002c0006t0001g0055 a0003c0003t0003g0093 others(5): Show |
8 | 156 | 0.0513 | 9 | c.164 others(28): Show |
SMCHD1 | ENSG00000101596.17 | transcript | ENST00000320876.11 | protein_coding | 12/47 | chr18 | TogoVar | |||||||
SMCHD1_chr18_2650726_2810017 | 2708908 | A | ATATATAT others(2): Show |
intron_variant | MODIFIER | HG01168.hp1 HG01169.hp1 HG01258.hp2 others(6): Show |
a0001 | a0001c0002a0001c0012 | a0001c0002t0001a0001c0002t0002a0001c0012t0001 | a0001c0002t0001g0158 a0001c0002t0001g0166 a0001c0002t0001g0186 others(6): Show |
9 | 298 | 0.0302 | 9 | c.226 others(26): Show |
SMCHD1 | ENSG00000101596.17 | transcript | ENST00000320876.11 | protein_coding | 17/47 | chr18 | TogoVar | |||||||
SMCHD1_chr18_2650726_2810017 | 2748387 | T | TATGTATA others(2): Show |
intron_variant | MODIFIER | HG01891.hp1 HG03041.hp1 HG04184.hp1 others(3): Show |
a0002a0003a0011 | a0002c0016a0003c0003a0011c0024 | a0002c0016t0002a0003c0003t0003a0011c0024t0029 | a0002c0016t0002g0004 a0003c0003t0003g0076 a0003c0003t0003g0079 others(3): Show |
6 | 335 | 0.0179 | 9 | c.392 others(26): Show |
SMCHD1 | ENSG00000101596.17 | transcript | ENST00000320876.11 | protein_coding | 30/47 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
SMCHD1_chr18_2650726_2810017 | 2759571 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG01109.hp2 HG01175.hp1 HG01255.hp1 others(30): Show |
a0001a0002a0003others(2): Show | a0001c0005a0001c0007a0002c0001others(3): Show | a0001c0005t0002a0001c0005t0004a0001c0005t0010others(8): Show | a0001c0005t0002g0266 a0001c0005t0004g0023 a0001c0005t0004g0024 others(30): Show |
33 | 52 | 0.6346 | 9 | c.434 others(28): Show |
SMCHD1 | ENSG00000101596.17 | transcript | ENST00000320876.11 | protein_coding | 34/47 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
SMCHD1_chr18_2650726_2810017 | 2785670 | A | AAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00738.hp1 HG01081.hp2 HG01258.hp2 others(9): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0036 a0001c0002t0001g0161 a0001c0002t0001g0162 others(9): Show |
12 | 20 | 0.6000 | 9 | c.571 others(28): Show |
SMCHD1 | ENSG00000101596.17 | transcript | ENST00000320876.11 | protein_coding | 45/47 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
SMCHD1_chr18_2650726_2810017 | 2793656 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00741.hp2 HG01261.hp2 HG01978.hp1 others(11): Show |
a0001 | a0001c0002a0001c0004a0001c0012 | a0001c0002t0001a0001c0002t0002a0001c0004t0001others(1): Show | a0001c0002t0001g0157 a0001c0002t0001g0161 a0001c0002t0001g0163 others(11): Show |
14 | 226 | 0.0619 | 9 | c.572 others(28): Show |
SMCHD1 | ENSG00000101596.17 | transcript | ENST00000320876.11 | protein_coding | 45/47 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | ||||||
SMCO2_chr12_27441736_27507185 | 27494487 | T | TTTATTAT others(2): Show |
intron_variant | MODIFIER | HG00609.hp1 HG00639.hp1 HG00639.hp2 others(50): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(4): Show | a0001c0001t0001g0024 a0001c0001t0001g0029 a0001c0001t0001g0030 others(45): Show |
53 | 93 | 0.5699 | 9 | c.657 others(24): Show |
SMCO2 | ENSG00000165935.10 | transcript | ENST00000535986.2 | protein_coding | 7/8 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SMG1_chr16_18799860_18931408 | 18887510 | T | TTTTCCTT others(2): Show |
intron_variant | MODIFIER | HG00323.hp1 HG01358.hp2 HG02451.hp1 others(8): Show |
a0001a0010 | a0001c0004a0010c0019 | a0001c0004t0004a0010c0019t0004 | a0001c0004t0004g0014 a0001c0004t0004g0015 a0001c0004t0004g0016 others(8): Show |
11 | 298 | 0.0369 | 9 | c.823 others(26): Show |
SMG1 | ENSG00000157106.18 | transcript | ENST00000446231.7 | protein_coding | 6/62 | chr16 | TogoVar | |||||||
SMG8_chr17_59205035_59220230 | 59215369 | G | GTTTTTTT others(2): Show |
downstream_gene_variant | MODIFIER | HG00741.hp2 HG01168.hp2 HG01255.hp1 others(12): Show |
a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0001 | 15 | 19 | 0.7895 | 9 | c.*36 others(18): Show |
SMG8 | ENSG00000167447.13 | transcript | ENST00000300917.10 | protein_coding | 140 | chr17 | TogoVar | |||||||
SMG9_chr19_43722983_43759962 | 43752902 | T | TAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG02258.hp2 HG02723.hp2 HG02886.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0011a0001c0001t0054 | a0001c0001t0005g0107 a0001c0001t0005g0108 a0001c0001t0011g0104 others(4): Show |
7 | 204 | 0.0343 | 9 | c.-7+ others(24): Show |
SMG9 | ENSG00000105771.14 | transcript | ENST00000270066.11 | protein_coding | 1/13 | chr19 | TogoVar | |||||||
SMIM10L1_chr12_11166194_11181016 | 11177472 | T | TGGCGGGG others(2): Show |
downstream_gene_variant | MODIFIER | HG01109.hp1 HG01243.hp2 HG02109.hp1 others(9): Show |
a0001 | a0001c0002 | a0001c0002t0003a0001c0002t0005a0001c0002t0008others(2): Show | a0001c0002t0003g0000 a0001c0002t0005g0000 a0001c0002t0008g0000 others(2): Show |
12 | 259 | 0.0463 | 9 | c.*59 others(20): Show |
SMIM10L1 | ENSG00000256537.5 | transcript | ENST00000622602.2 | protein_coding | 1457 | chr12 | TogoVar | |||||||
SMIM12_chr1_34845362_34864749 | 34853985 | A | AAACAACA others(2): Show |
3_prime_UTR_variant | MODIFIER | HG01257.hp2 HG02015.hp1 HG02027.hp2 others(27): Show |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0013a0001c0001t0014others(15): Show | a0001c0001t0008g0007 a0001c0001t0013g0015 a0001c0001t0013g0088 others(16): Show |
30 | 178 | 0.1685 | 9 | c.*17 others(20): Show |
SMIM12 | ENSG00000163866.9 | transcript | ENST00000521580.3 | protein_coding | 2/2 | 1713 | chr1 | TogoVar | ||||||
SMIM13_chr6_11088834_11143733 | 11138999 | A | ATTTAACT others(2): Show |
downstream_gene_variant | MODIFIER | HG00735.hp1 HG03098.hp1 HG03710.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0028a0001c0001t0029a0001c0002t0027 | a0001c0001t0028g0176 a0001c0001t0029g0177 a0001c0002t0027g0249 |
3 | 398 | 0.0075 | 9 | c.*43 others(20): Show |
SMIM13 | ENSG00000224531.6 | transcript | ENST00000416247.4 | protein_coding | 267 | chr6 | TogoVar | |||||||
SMIM14_chr4_39541336_39643865 | 39581518 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00099.hp2 HG00408.hp2 HG00544.hp1 others(55): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0009a0001c0001t0014others(9): Show | a0001c0001t0002g0004 a0001c0001t0002g0022 a0001c0001t0002g0025 others(55): Show |
58 | 319 | 0.1818 | 9 | c.76- others(24): Show |
SMIM14 | ENSG00000163683.12 | transcript | ENST00000295958.10 | protein_coding | 2/4 | chr4 | TogoVar | |||||||
SMIM17_chr19_56638159_56662247 | 56659734 | C | CTTTTTTT others(2): Show |
downstream_gene_variant | MODIFIER | HG00408.hp1 HG00544.hp2 HG00609.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0001 a0001c0001t0004g0002 a0001c0001t0004g0173 |
9 | 208 | 0.0433 | 9 | c.*45 others(20): Show |
SMIM17 | ENSG00000268182.6 | transcript | ENST00000598409.6 | protein_coding | 2488 | chr19 | TogoVar | |||||||
SMIM2_chr13_44138150_44166257 | 44154558 | A | ACACACTC others(2): Show |
intron_variant | MODIFIER | HG02257.hp1 HG02451.hp1 HG02818.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009 | 7 | 37 | 0.1892 | 9 | c.253 others(26): Show |
SMIM2 | ENSG00000139656.8 | transcript | ENST00000400419.2 | protein_coding | 2/2 | chr13 | TogoVar | |||||||
SMIM31_chr4_164749131_164808795 | 164758801 | A | ATTTTTTT others(2): Show |
intron_variant | MODIFIER | HG00558.hp1 HG00597.hp1 HG00673.hp1 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0037 a0001c0001t0001g0051 a0001c0001t0001g0060 others(23): Show |
26 | 35 | 0.7429 | 9 | c.-26 others(26): Show |
SMIM31 | ENSG00000248771.5 | transcript | ENST00000507311.1 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SMIM31_chr4_164749131_164808795 | 164768427 | C | CAAAAAAA others(2): Show |
intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(84): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0264 a0001c0001t0001g0279 a0001c0001t0001g0287 others(84): Show |
87 | 259 | 0.3359 | 9 | c.-25 others(26): Show |
SMIM31 | ENSG00000248771.5 | transcript | ENST00000507311.1 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SMIM35_chr11_117998634_118091963 | 118027016 | C | CTTTTTTT others(2): Show |
intron_variant | MODIFIER | NA18946.hp2 NA18999.hp1 NA19009.hp1 others(3): Show |
a0002 | a0002c0002 | a0002c0002t0002a0002c0002t0005 | a0002c0002t0002g0149 a0002c0002t0002g0305 a0002c0002t0005g0371 others(3): Show |
6 | 101 | 0.0594 | 9 | c.8-1 others(24): Show |
SMIM35 | ENSG00000255274.10 | transcript | ENST00000689828.1 | protein_coding | 1/4 | chr11 | TogoVar | |||||||
SMIM36_chr17_55444856_55516452 | 55500948 | A | ATTTTATA others(2): Show |
intron_variant | MODIFIER | HG02055.hp2 HG02559.hp2 HG03139.hp1 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0010 | a0001c0001t0004g0150 a0001c0001t0004g0152 a0001c0001t0010g0151 |
3 | 253 | 0.0119 | 9 | c.*17 others(28): Show |
SMIM36 | ENSG00000261873.3 | transcript | ENST00000636752.2 | protein_coding | 1/4 | chr17 | TogoVar | |||||||
SMIM36_chr17_55444856_55516452 | 55500977 | A | ATTTTATA others(2): Show |
intron_variant | MODIFIER | HG02055.hp2 HG02559.hp2 HG03139.hp1 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0010 | a0001c0001t0004g0150 a0001c0001t0004g0152 a0001c0001t0010g0151 |
3 | 218 | 0.0138 | 9 | c.*17 others(28): Show |
SMIM36 | ENSG00000261873.3 | transcript | ENST00000636752.2 | protein_coding | 1/4 | chr17 | TogoVar | |||||||
SMIM43_chr4_121753930_121770164 | 121769649 | A | ATGCATGT others(2): Show |
upstream_gene_variant | MODIFIER | HG00140.hp2 HG00639.hp2 HG00733.hp2 others(30): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0011a0001c0001t0021 | a0001c0001t0003g0003 a0001c0001t0003g0054 a0001c0001t0003g0058 others(2): Show |
33 | 436 | 0.0757 | 9 | c.-45 others(20): Show |
SMIM43 | ENSG00000164112.14 | transcript | ENST00000643802.2 | protein_coding | 4486 | chr4 | TogoVar |