Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view GPRC5A 197 62 47 33 0 0 0.764 0.240 0.182 0.128 0.000 0.000 chr12 12886562 12922937
view GPRC5B 203 70 46 29 0 0 0.787 0.271 0.178 0.112 0.000 0.000 chr16 19851691 19889848
view GPRC5C 168 55 76 41 0 0 0.651 0.213 0.295 0.159 0.000 0.000 chr17 74427088 74452429
view GPRC5D 202 63 48 34 0 0 0.783 0.244 0.186 0.132 0.000 0.000 chr12 12935575 12957170
view GPRC6A 183 60 66 39 0 0 0.709 0.233 0.256 0.151 0.000 0.000 chr6 116787085 116834083
view GPRIN1 198 65 52 35 0 0 0.767 0.252 0.202 0.136 0.000 0.000 chr5 176590802 176615156
view GPRIN2 68 44 16 14 172 45 0.264 0.171 0.062 0.054 0.667 0.174 chr10 46536736 46561658
view GPRIN3 177 56 55 31 0 0 0.686 0.217 0.213 0.120 0.000 0.000 chr4 89231383 89312800
view GPS1 219 73 39 32 0 0 0.849 0.283 0.151 0.124 0.000 0.000 chr17 82046898 82062470
view GPS2 206 67 45 32 0 0 0.798 0.260 0.174 0.124 0.000 0.000 chr17 7307661 7320360
view GPSM1 199 56 48 40 0 0 0.771 0.217 0.186 0.155 0.000 0.000 chr9 136322539 136364601
view GPSM2 129 34 101 61 0 0 0.500 0.132 0.391 0.236 0.000 0.000 chr1 108871985 108939545
view GPSM3 220 78 36 27 1 0 0.853 0.302 0.140 0.105 0.004 0.000 chr6 32185766 32197643
view GPT2 96 12 143 79 0 0 0.372 0.047 0.554 0.306 0.000 0.000 chr16 46879362 46936289
view GPT 192 60 55 36 1 1 0.744 0.233 0.213 0.140 0.004 0.004 chr8 144499140 144512172
view GPX1 162 42 92 61 0 0 0.628 0.163 0.357 0.236 0.000 0.000 chr3 49352176 49363353
view GPX2 206 73 48 28 2 2 0.798 0.283 0.186 0.109 0.008 0.008 chr14 64934158 64947745
view GPX3 235 92 22 12 0 0 0.911 0.357 0.085 0.047 0.000 0.000 chr5 151015591 151033988
view GPX4 213 66 38 32 0 0 0.826 0.256 0.147 0.124 0.000 0.000 chr19 1098994 1111779
view GPX5 205 71 51 32 1 1 0.795 0.275 0.198 0.124 0.004 0.004 chr6 28520881 28539955
view GPX6 216 85 38 17 1 1 0.837 0.329 0.147 0.066 0.004 0.004 chr6 28498296 28520793
view GPX7 185 57 68 44 0 0 0.717 0.221 0.264 0.171 0.000 0.000 chr1 52597371 52614051
view GPX8 206 77 51 27 0 0 0.798 0.298 0.198 0.105 0.000 0.000 chr5 55155171 55172297
view GRAMD1A 180 55 62 37 0 0 0.698 0.213 0.240 0.143 0.000 0.000 chr19 34995323 35031469
view GRAMD1B 140 26 63 44 0 0 0.543 0.101 0.244 0.171 0.000 0.000 chr11 123425269 123632767
view GRAMD1C 161 45 60 36 0 0 0.624 0.174 0.233 0.140 0.000 0.000 chr3 113833788 113952174
view GRAMD2A 182 62 68 38 0 0 0.705 0.240 0.264 0.147 0.000 0.000 chr15 72154806 72202787
view GRAMD2B 166 38 62 47 0 0 0.643 0.147 0.240 0.182 0.000 0.000 chr5 126418409 126499364
view GRAMD4 163 42 68 42 0 0 0.632 0.163 0.264 0.163 0.000 0.000 chr22 46615386 46684785
view GRAP2 157 37 80 56 0 0 0.609 0.143 0.310 0.217 0.000 0.000 chr22 39896084 39978721
view GRAPL 36 1 119 38 0 0 0.140 0.004 0.461 0.147 0.000 0.000 chr17 19122589 19164187
view GRAP 129 41 105 50 0 0 0.500 0.159 0.407 0.194 0.000 0.000 chr17 19015656 19051957
view GRB10 138 39 72 40 0 0 0.535 0.151 0.279 0.155 0.000 0.000 chr7 50585068 50787896
view GRB14 146 39 78 44 0 0 0.566 0.151 0.302 0.171 0.000 0.000 chr2 164487417 164626482
view GRB2 122 12 107 70 0 0 0.473 0.047 0.415 0.271 0.000 0.000 chr17 75313076 75410678
view GRB7 192 65 58 33 0 0 0.744 0.252 0.225 0.128 0.000 0.000 chr17 39732938 39752285
view GREB1L 73 14 129 68 0 0 0.283 0.054 0.500 0.264 0.000 0.000 chr18 21237232 21531112
view GREB1 153 47 64 36 0 0 0.593 0.182 0.248 0.140 0.000 0.000 chr2 11529045 11647788
view GREM1 210 68 39 30 0 0 0.814 0.264 0.151 0.116 0.000 0.000 chr15 32713004 32750106
view GREM2 188 67 41 23 0 0 0.729 0.260 0.159 0.089 0.000 0.000 chr1 240484573 240617155
view GRHL1 208 71 42 31 0 0 0.806 0.275 0.163 0.120 0.000 0.000 chr2 9946693 10007277
view GRHL2 152 54 57 29 0 0 0.589 0.209 0.221 0.112 0.000 0.000 chr8 101487439 101674726
view GRHL3 185 52 54 36 0 0 0.717 0.202 0.209 0.140 0.000 0.000 chr1 24314357 24360318
view GRHPR 200 68 55 35 1 0 0.775 0.264 0.213 0.136 0.004 0.000 chr9 37417696 37441990
view GRIA1 96 7 104 71 0 0 0.372 0.027 0.403 0.275 0.000 0.000 chr5 153485670 153818869
view GRIA2 108 33 114 61 0 0 0.419 0.128 0.442 0.236 0.000 0.000 chr4 157215728 157371075
view GRIA3 43 6 168 79 0 0 0.167 0.023 0.651 0.306 0.000 0.000 chrX 123179278 123495915
view GRIA4 91 20 98 55 0 0 0.353 0.078 0.380 0.213 0.000 0.000 chr11 105605073 105987090
view GRID1 48 3 83 40 0 0 0.186 0.012 0.322 0.155 0.000 0.000 chr10 85594552 86371795
view GRID2IP 182 52 52 35 0 0 0.705 0.202 0.202 0.136 0.000 0.000 chr7 6491778 6556461