Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view HEY2 199 71 55 31 0 0 0.771 0.275 0.213 0.120 0.000 0.000 chr6 125744632 125766269
view HEYL 219 77 36 26 0 0 0.849 0.298 0.140 0.101 0.000 0.000 chr1 39618435 39644643
view HFE 200 60 52 40 1 1 0.775 0.233 0.202 0.155 0.004 0.004 chr6 26082429 26103343
view HFM1 180 65 59 30 0 0 0.698 0.252 0.229 0.116 0.000 0.000 chr1 91255766 91409837
view HGD 186 57 47 30 0 0 0.721 0.221 0.182 0.116 0.000 0.000 chr3 120623172 120687239
view HGFAC 226 80 30 23 0 0 0.876 0.310 0.116 0.089 0.000 0.000 chr4 3436968 3454486
view HGF 135 35 89 49 0 0 0.523 0.136 0.345 0.190 0.000 0.000 chr7 81694010 81775047
view HGH1 170 54 85 48 0 0 0.659 0.209 0.329 0.186 0.000 0.000 chr8 144132774 144145851
view HGSNAT 116 18 114 75 0 0 0.450 0.070 0.442 0.291 0.000 0.000 chr8 43135464 43207855
view HGS 206 72 47 31 0 0 0.798 0.279 0.182 0.120 0.000 0.000 chr17 81679011 81707121
view HHATL 205 66 49 35 0 0 0.795 0.256 0.190 0.136 0.000 0.000 chr3 42687663 42707798
view HHAT 133 35 55 35 0 0 0.516 0.136 0.213 0.136 0.000 0.000 chr1 210323902 210681290
view HHEX 186 54 66 46 0 0 0.721 0.209 0.256 0.178 0.000 0.000 chr10 92684955 92700647
view HHIPL1 186 50 57 42 0 0 0.721 0.194 0.221 0.163 0.000 0.000 chr14 99640129 99685569
view HHIPL2 208 77 45 25 0 0 0.806 0.298 0.174 0.097 0.000 0.000 chr1 222517264 222553104
view HHIP 157 61 85 37 0 0 0.609 0.236 0.329 0.143 0.000 0.000 chr4 144641156 144750271
view HHLA1 189 56 46 31 0 0 0.733 0.217 0.178 0.120 0.000 0.000 chr8 132056480 132116157
view HHLA2 160 56 72 37 0 0 0.620 0.217 0.279 0.143 0.000 0.000 chr3 108291548 108383285
view HIBADH 162 48 78 45 0 0 0.628 0.186 0.302 0.174 0.000 0.000 chr7 27520442 27667883
view HIBCH 183 73 56 28 0 0 0.709 0.283 0.217 0.109 0.000 0.000 chr2 190198920 190324826
view HIC1 206 65 44 33 1 0 0.798 0.252 0.171 0.128 0.004 0.000 chr17 2050103 2068241
view HIC2 143 39 92 54 0 0 0.554 0.151 0.357 0.209 0.000 0.000 chr22 21412371 21456463
view HID1 181 42 65 54 0 0 0.702 0.163 0.252 0.209 0.000 0.000 chr17 74945742 74977759
view HIF1AN 159 52 92 49 0 0 0.616 0.202 0.357 0.190 0.000 0.000 chr10 100530943 100564998
view HIF1A 160 65 80 33 0 0 0.620 0.252 0.310 0.128 0.000 0.000 chr14 61690513 61753258
view HIF3A 208 73 34 20 0 0 0.806 0.283 0.132 0.078 0.000 0.000 chr19 46292042 46348433
view HIGD1A 199 67 53 34 0 0 0.771 0.260 0.205 0.132 0.000 0.000 chr3 42777908 42809490
view HIGD1B 207 70 47 32 2 1 0.802 0.271 0.182 0.124 0.008 0.004 chr17 44842883 44855476
view HIGD1C 189 66 58 32 1 1 0.733 0.256 0.225 0.124 0.004 0.004 chr12 50947544 50975607
view HIGD2A 220 80 37 24 0 0 0.853 0.310 0.143 0.093 0.000 0.000 chr5 176383751 176394761
view HIGD2B 217 79 39 24 0 0 0.841 0.306 0.151 0.093 0.000 0.000 chr15 72670798 72691182
view HIKESHI 198 74 54 28 0 0 0.767 0.287 0.209 0.109 0.000 0.000 chr11 86297240 86350943
view HILPDA 211 77 44 25 1 1 0.818 0.298 0.171 0.097 0.004 0.004 chr7 128450878 128463418
view HINFP 201 74 54 28 0 0 0.779 0.287 0.209 0.109 0.000 0.000 chr11 119116580 119141059
view HINT1 211 77 47 28 0 0 0.818 0.298 0.182 0.109 0.000 0.000 chr5 131154027 131170256
view HINT2 209 79 45 23 0 0 0.810 0.306 0.174 0.089 0.000 0.000 chr9 35807960 35820042
view HINT3 133 22 115 77 0 0 0.516 0.085 0.446 0.298 0.000 0.000 chr6 125951770 125985244
view HIP1R 173 46 69 44 0 0 0.671 0.178 0.267 0.171 0.000 0.000 chr12 122830457 122867961
view HIP1 126 22 66 38 0 0 0.488 0.085 0.256 0.147 0.000 0.000 chr7 75528298 75743941
view HIPK1 190 61 46 29 0 0 0.736 0.236 0.178 0.112 0.000 0.000 chr1 113924324 113982869
view HIPK2 76 5 115 69 0 0 0.295 0.019 0.446 0.267 0.000 0.000 chr7 139556570 139782998
view HIPK3 170 59 66 35 0 0 0.659 0.229 0.256 0.136 0.000 0.000 chr11 33252381 33362023
view HIPK4 190 58 58 40 0 0 0.736 0.225 0.225 0.155 0.000 0.000 chr19 40374271 40395181
view HIRA 181 72 62 25 0 0 0.702 0.279 0.240 0.097 0.000 0.000 chr22 19325698 19436733
view HIRIP3 174 60 79 42 0 0 0.674 0.233 0.306 0.163 0.000 0.000 chr16 29987330 30000617
view HIVEP1 171 56 60 34 0 0 0.663 0.217 0.233 0.132 0.000 0.000 chr6 12007312 12169999
view HIVEP2 143 34 58 38 0 0 0.554 0.132 0.225 0.147 0.000 0.000 chr6 142746469 142950176
view HIVEP3 67 11 79 41 0 0 0.260 0.043 0.306 0.159 0.000 0.000 chr1 41501365 41923922
view HJURP 224 85 33 19 0 0 0.868 0.329 0.128 0.074 0.000 0.000 chr2 233831702 233859535
view HJV 190 70 66 34 1 1 0.736 0.271 0.256 0.132 0.004 0.004 chr1 146012470 146026735