Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view ADAM15 161 32 90 69 0 0 0.624 0.124 0.349 0.267 0.000 0.000 chr1 155046316 155067775
view ADAM17 116 8 109 83 0 0 0.450 0.031 0.422 0.322 0.000 0.000 chr2 9483486 9560830
view ADAM18 173 48 58 41 1 1 0.671 0.186 0.225 0.159 0.004 0.004 chr8 39579568 39735065
view ADAM19 154 38 70 46 0 0 0.597 0.147 0.271 0.178 0.000 0.000 chr5 157472304 157580775
view ADAM20 199 73 56 29 0 0 0.771 0.283 0.217 0.112 0.000 0.000 chr14 70517358 70540004
view ADAM21 212 82 44 21 1 1 0.822 0.318 0.171 0.081 0.004 0.004 chr14 70447174 70464905
view ADAM22 114 29 77 45 0 0 0.442 0.112 0.298 0.174 0.000 0.000 chr7 87929251 88207889
view ADAM23 178 63 54 29 0 0 0.690 0.244 0.209 0.112 0.000 0.000 chr2 206438532 206626127
view ADAM28 173 59 62 32 0 0 0.671 0.229 0.240 0.124 0.000 0.000 chr8 24289069 24364014
view ADAM29 164 45 78 54 0 0 0.636 0.174 0.302 0.209 0.000 0.000 chr4 174913358 174983180
view ADAM2 164 51 69 41 0 0 0.636 0.198 0.267 0.159 0.000 0.000 chr8 39738735 39843227
view ADAM30 193 67 63 36 0 0 0.748 0.260 0.244 0.140 0.000 0.000 chr1 119888533 119901515
view ADAM32 128 40 82 49 0 0 0.496 0.155 0.318 0.190 0.000 0.000 chr8 39102734 39289917
view ADAM33 230 83 24 18 0 0 0.891 0.322 0.093 0.070 0.000 0.000 chr20 3662975 3687010
view ADAM7 179 54 66 42 0 0 0.694 0.209 0.256 0.163 0.000 0.000 chr8 24436026 24514565
view ADAM8 192 55 57 42 0 0 0.744 0.213 0.221 0.163 0.000 0.000 chr10 133257423 133281868
view ADAM9 165 52 76 46 0 0 0.640 0.202 0.295 0.178 0.000 0.000 chr8 38991973 39110261
view ADAMDEC1 201 76 54 27 0 0 0.779 0.295 0.209 0.105 0.000 0.000 chr8 24379285 24411013
view ADAMTS10 191 55 53 39 0 0 0.740 0.213 0.205 0.151 0.000 0.000 chr19 8575240 8615715
view ADAMTS12 111 32 76 41 0 0 0.430 0.124 0.295 0.159 0.000 0.000 chr5 33518535 33896990
view ADAMTS13 181 49 61 43 0 0 0.702 0.190 0.236 0.167 0.000 0.000 chr9 133417367 133464386
view ADAMTS14 176 48 53 37 0 0 0.682 0.186 0.205 0.143 0.000 0.000 chr10 70667506 70767441
view ADAMTS15 198 62 42 29 0 0 0.767 0.240 0.163 0.112 0.000 0.000 chr11 130443645 130481645
view ADAMTS16 165 51 53 35 0 0 0.640 0.198 0.205 0.136 0.000 0.000 chr5 5135330 5325304
view ADAMTS17 113 21 62 39 0 0 0.438 0.081 0.240 0.151 0.000 0.000 chr15 99966437 100346975
view ADAMTS18 162 45 57 37 0 0 0.628 0.174 0.221 0.143 0.000 0.000 chr16 77277128 77440034
view ADAMTS19 112 26 98 57 0 0 0.434 0.101 0.380 0.221 0.000 0.000 chr5 129455298 129743683
view ADAMTS1 239 91 16 12 1 0 0.926 0.353 0.062 0.047 0.004 0.000 chr21 26830755 26850409
view ADAMTS20 152 53 72 33 0 0 0.589 0.205 0.279 0.128 0.000 0.000 chr12 43348866 43557203
view ADAMTS2 137 28 52 32 0 0 0.531 0.109 0.202 0.124 0.000 0.000 chr5 179105853 179350461
view ADAMTS3 90 23 91 40 0 0 0.349 0.089 0.353 0.155 0.000 0.000 chr4 72275969 72574221
view ADAMTS4 186 66 63 32 0 0 0.721 0.256 0.244 0.124 0.000 0.000 chr1 161179302 161204054
view ADAMTS5 198 69 51 30 0 0 0.767 0.267 0.198 0.116 0.000 0.000 chr21 26912922 26972088
view ADAMTS6 101 21 100 57 0 0 0.391 0.081 0.388 0.221 0.000 0.000 chr5 65143738 65486920
view ADAMTS7 189 66 53 28 0 0 0.733 0.256 0.205 0.109 0.000 0.000 chr15 78754206 78816464
view ADAMTS8 211 73 36 21 0 0 0.818 0.283 0.140 0.081 0.000 0.000 chr11 130399923 130433609
view ADAMTS9 142 49 58 27 0 0 0.550 0.190 0.225 0.105 0.000 0.000 chr3 64510654 64693000
view ADAMTSL1 108 25 52 34 0 0 0.419 0.097 0.202 0.132 0.000 0.000 chr9 18469153 18915950
view ADAMTSL2 75 5 88 37 0 0 0.291 0.019 0.341 0.143 0.000 0.000 chr9 133529704 133580519
view ADAMTSL3 136 42 68 36 0 0 0.527 0.163 0.264 0.140 0.000 0.000 chr15 83649123 84044842
view ADAMTSL4 219 76 32 22 0 0 0.849 0.295 0.124 0.085 0.000 0.000 chr1 150544408 150565933
view ADAMTSL5 175 47 58 36 0 0 0.678 0.182 0.225 0.140 0.000 0.000 chr19 1500022 1518019
view ADAP1 6 0 56 16 0 0 0.023 0.000 0.217 0.062 0.000 0.000 chr7 892900 959680
view ADAP2 140 24 97 66 0 0 0.543 0.093 0.376 0.256 0.000 0.000 chr17 30916945 30964322
view ADARB1 174 56 52 30 0 0 0.674 0.217 0.202 0.116 0.000 0.000 chr21 45069580 45231560
view ADARB2 53 12 76 33 0 0 0.205 0.047 0.295 0.128 0.000 0.000 chr10 1172313 1742525
view ADAR 207 73 47 29 0 0 0.802 0.283 0.182 0.112 0.000 0.000 chr1 154577057 154613186
view ADAT1 173 50 70 45 1 1 0.671 0.194 0.271 0.174 0.004 0.004 chr16 75591868 75628281
view ADAT2 160 49 91 51 0 0 0.620 0.190 0.353 0.198 0.000 0.000 chr6 143417832 143455695
view ADAT3 220 75 31 24 1 1 0.853 0.291 0.120 0.093 0.004 0.004 chr19 1900399 1918447