Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view DTHD1 153 36 67 46 0 0 0.593 0.140 0.260 0.178 0.000 0.000 chr4 36276616 36352511
view DTL 181 62 66 38 0 0 0.702 0.240 0.256 0.147 0.000 0.000 chr1 212030748 212110013
view DTNA 55 1 155 89 0 0 0.213 0.004 0.601 0.345 0.000 0.000 chr18 34705298 34896844
view DTNBP1 156 40 75 50 0 0 0.605 0.155 0.291 0.194 0.000 0.000 chr6 15517807 15668028
view DTNB 83 15 100 59 0 0 0.322 0.058 0.388 0.229 0.000 0.000 chr2 25372243 25678577
view DTWD1 170 62 71 37 0 0 0.659 0.240 0.275 0.143 0.000 0.000 chr15 49616048 49661232
view DTWD2 120 17 101 71 0 0 0.465 0.066 0.391 0.275 0.000 0.000 chr5 118831074 118993547
view DTX1 168 39 71 51 0 0 0.651 0.151 0.275 0.198 0.000 0.000 chr12 113051730 113103025
view DTX2 139 24 77 46 0 0 0.539 0.093 0.298 0.178 0.000 0.000 chr7 76456709 76510991
view DTX3L 235 88 19 14 1 0 0.911 0.341 0.074 0.054 0.004 0.000 chr3 122559338 122580203
view DTX3 208 70 49 34 0 0 0.806 0.271 0.190 0.132 0.000 0.000 chr12 57599824 57614802
view DTX4 194 72 51 23 0 0 0.752 0.279 0.198 0.089 0.000 0.000 chr11 59167132 59213588
view DTYMK 209 76 47 27 0 0 0.810 0.295 0.182 0.105 0.000 0.000 chr2 241670747 241691815
view DUOX1 192 65 55 30 0 0 0.744 0.252 0.213 0.116 0.000 0.000 chr15 45124994 45170574
view DUOX2 139 26 108 70 0 0 0.539 0.101 0.419 0.271 0.000 0.000 chr15 45087650 45119172
view DUOXA1 197 60 54 40 0 0 0.764 0.233 0.209 0.155 0.000 0.000 chr15 45112366 45134879
view DUOXA2 184 52 70 50 1 0 0.713 0.202 0.271 0.194 0.004 0.000 chr15 45109326 45123421
view DUS1L 211 66 42 34 0 0 0.818 0.256 0.163 0.132 0.000 0.000 chr17 82052506 82070804
view DUS2 116 26 118 63 0 0 0.450 0.101 0.457 0.244 0.000 0.000 chr16 68018284 68084320
view DUS3L 181 55 69 44 0 0 0.702 0.213 0.267 0.171 0.000 0.000 chr19 5780140 5796163
view DUS4L 205 71 48 30 1 1 0.795 0.275 0.186 0.116 0.004 0.004 chr7 107558971 107583523
view DUSP10 197 72 48 25 0 0 0.764 0.279 0.186 0.097 0.000 0.000 chr1 221696424 221747089
view DUSP11 192 64 59 37 0 0 0.744 0.248 0.229 0.143 0.000 0.000 chr2 73757213 73785103
view DUSP12 222 85 35 20 0 0 0.860 0.329 0.136 0.078 0.000 0.000 chr1 161744786 161762238
view DUSP13 201 69 54 34 1 0 0.779 0.267 0.209 0.132 0.004 0.000 chr10 75089436 75104512
view DUSP14 210 80 45 23 0 0 0.814 0.310 0.174 0.089 0.000 0.000 chr17 37484891 37518498
view DUSP15 188 52 65 48 0 0 0.729 0.202 0.252 0.186 0.000 0.000 chr20 31856077 31875527
view DUSP16 175 65 64 31 0 0 0.678 0.252 0.248 0.120 0.000 0.000 chr12 12468282 12567863
view DUSP18 223 81 31 21 0 0 0.864 0.314 0.120 0.081 0.000 0.000 chr22 30656445 30672875
view DUSP19 163 48 86 48 0 0 0.632 0.186 0.333 0.186 0.000 0.000 chr2 183073747 183105008
view DUSP1 230 87 25 16 0 0 0.891 0.337 0.097 0.062 0.000 0.000 chr5 172763096 172776195
view DUSP21 77 16 178 86 0 0 0.298 0.062 0.690 0.333 0.000 0.000 chrX 44839021 44849888
view DUSP22 110 46 51 30 86 23 0.426 0.178 0.198 0.116 0.333 0.089 chr6 287487 356355
view DUSP23 240 93 17 11 1 1 0.930 0.360 0.066 0.043 0.004 0.004 chr1 159775962 159787543
view DUSP26 209 68 45 33 0 0 0.810 0.264 0.174 0.128 0.000 0.000 chr8 33586330 33605023
view DUSP28 210 65 44 37 1 0 0.814 0.252 0.171 0.143 0.004 0.000 chr2 240555357 240570256
view DUSP29 183 61 61 34 0 0 0.709 0.236 0.236 0.132 0.000 0.000 chr10 75032472 75078642
view DUSP2 210 74 45 29 1 0 0.814 0.287 0.174 0.112 0.004 0.000 chr2 96138169 96150440
view DUSP3 181 49 70 51 1 0 0.702 0.190 0.271 0.198 0.004 0.000 chr17 43761125 43783977
view DUSP4 195 60 55 38 2 1 0.756 0.233 0.213 0.147 0.008 0.004 chr8 29328064 29355684
view DUSP5 204 76 52 28 0 0 0.791 0.295 0.202 0.109 0.000 0.000 chr10 110492907 110516533
view DUSP6 200 69 57 36 1 0 0.775 0.267 0.221 0.140 0.004 0.000 chr12 89342235 89357501
view DUSP7 191 73 60 28 0 0 0.740 0.283 0.233 0.109 0.000 0.000 chr3 52043919 52061571
view DUSP8 183 57 61 38 0 0 0.709 0.221 0.236 0.147 0.000 0.000 chr11 1549051 1577271
view DUSP9 102 29 151 73 0 0 0.395 0.112 0.585 0.283 0.000 0.000 chrX 153642203 153656326
view DUT 193 72 62 30 0 0 0.748 0.279 0.240 0.116 0.000 0.000 chr15 48326429 48348373
view DUX4 0 0 0 0 0 0 0.000 0.000 0.000 0.000 0.000 0.000 chr4 190168774 190180845
view DUXA 222 76 34 27 0 0 0.860 0.295 0.132 0.105 0.000 0.000 chr19 57149021 57172485
view DUXB 210 82 47 22 1 1 0.814 0.318 0.182 0.085 0.004 0.004 chr16 75688893 75706461
view DVL1 171 43 79 54 0 0 0.663 0.167 0.306 0.209 0.000 0.000 chr1 1330278 1354418