Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
EARS2 142 39 101 55 0 0 0.550 0.151 0.391 0.213 0.000 0.000 chr16 23515754 23562350
EBAG9 177 49 70 46 0 0 0.686 0.190 0.271 0.178 0.000 0.000 chr8 109535173 109570996
EBF1 98 13 91 54 0 0 0.380 0.050 0.353 0.209 0.000 0.000 chr5 158690920 159104916
EBF2 109 19 91 51 0 0 0.422 0.074 0.353 0.198 0.000 0.000 chr8 25836725 26050413
EBF3 168 49 46 28 0 0 0.651 0.190 0.178 0.109 0.000 0.000 chr10 129830233 129969274
EBF4 193 62 45 29 0 0 0.748 0.240 0.174 0.112 0.000 0.000 chr20 2687780 2765108
EBI3 218 76 33 23 1 1 0.845 0.295 0.128 0.089 0.004 0.004 chr19 4224523 4242528
EBLN1 215 82 41 22 0 0 0.833 0.318 0.159 0.085 0.000 0.000 chr10 22203475 22223015
EBLN2 213 76 41 26 0 0 0.826 0.295 0.159 0.101 0.000 0.000 chr3 73056659 73068337
EBNA1BP2 195 60 60 43 0 0 0.756 0.233 0.233 0.167 0.000 0.000 chr1 43159184 43177290
EBPL 204 66 48 35 0 0 0.791 0.256 0.186 0.136 0.000 0.000 chr13 49655674 49696486
EBP 93 28 159 71 0 0 0.360 0.109 0.616 0.275 0.000 0.000 chrX 48516808 48533716
ECD 135 46 114 57 0 0 0.523 0.178 0.442 0.221 0.000 0.000 chr10 73128668 73173008
ECE1 151 37 71 46 0 0 0.585 0.143 0.275 0.178 0.000 0.000 chr1 21212250 21295463
ECE2 198 67 55 34 0 0 0.767 0.260 0.213 0.132 0.000 0.000 chr3 184271022 184298031
ECEL1 218 78 34 22 1 1 0.845 0.302 0.132 0.085 0.004 0.004 chr2 232474827 232492834
ECH1 209 71 46 33 0 0 0.810 0.275 0.178 0.128 0.000 0.000 chr19 38810422 38836794
ECHDC1 178 56 68 39 0 0 0.690 0.217 0.264 0.151 0.000 0.000 chr6 127283712 127348609
ECHDC2 156 53 88 43 0 0 0.605 0.205 0.341 0.167 0.000 0.000 chr1 52890910 52926740
ECHDC3 209 77 40 20 0 0 0.810 0.298 0.155 0.078 0.000 0.000 chr10 11737382 11769070
ECHS1 176 45 71 51 0 0 0.682 0.174 0.275 0.198 0.000 0.000 chr10 133357485 133378354
ECI1 217 76 33 23 0 0 0.841 0.295 0.128 0.089 0.000 0.000 chr16 2234402 2256587
ECI2 184 66 68 36 0 0 0.713 0.256 0.264 0.140 0.000 0.000 chr6 4110706 4140575
ECM1 209 72 46 31 0 0 0.810 0.279 0.178 0.120 0.000 0.000 chr1 150503109 150518789
ECM2 199 75 55 26 0 0 0.771 0.291 0.213 0.101 0.000 0.000 chr9 92490315 92540990
ECPAS 176 60 67 36 0 0 0.682 0.233 0.260 0.140 0.000 0.000 chr9 111355685 111489383
ECRG4 216 74 41 30 0 0 0.837 0.287 0.159 0.116 0.000 0.000 chr2 106060688 106083155
ECSCR 184 62 69 39 0 0 0.713 0.240 0.267 0.151 0.000 0.000 chr5 139443560 139467743
ECSIT 155 37 94 60 0 0 0.601 0.143 0.364 0.233 0.000 0.000 chr19 11500929 11534134
ECT2L 162 55 64 27 0 0 0.628 0.213 0.248 0.105 0.000 0.000 chr6 138791087 138909070
ECT2 158 53 82 47 0 0 0.612 0.205 0.318 0.182 0.000 0.000 chr3 172745726 172826474
EDA2R 46 6 205 96 0 0 0.178 0.023 0.795 0.372 0.000 0.000 chrX 66590637 66644078
EDARADD 146 38 62 39 0 0 0.566 0.147 0.240 0.151 0.000 0.000 chr1 236389286 236489930
EDAR 112 19 123 77 0 0 0.434 0.074 0.477 0.298 0.000 0.000 chr2 108889471 108994220
EDA 53 3 171 77 0 0 0.205 0.012 0.663 0.298 0.000 0.000 chrX 69611113 70044472
EDC3 142 52 102 47 0 0 0.550 0.202 0.395 0.182 0.000 0.000 chr15 74625558 74701024
EDC4 119 22 124 75 1 0 0.461 0.085 0.481 0.291 0.004 0.000 chr16 67868052 67889499
EDDM13 197 66 47 32 0 0 0.764 0.256 0.182 0.124 0.000 0.000 chr19 56267748 56315454
EDDM3A 222 78 34 26 2 1 0.860 0.302 0.132 0.101 0.008 0.004 chr14 20740887 20753380
EDDM3B 239 90 18 14 1 1 0.926 0.349 0.070 0.054 0.004 0.004 chr14 20763404 20775948
EDEM1 186 63 55 29 1 1 0.721 0.244 0.213 0.112 0.004 0.004 chr3 5182707 5224958
EDEM2 165 42 78 52 0 0 0.640 0.163 0.302 0.202 0.000 0.000 chr20 35110364 35152336
EDEM3 161 55 83 44 0 0 0.624 0.213 0.322 0.171 0.000 0.000 chr1 184685237 184759858
EDF1 188 55 60 40 0 0 0.729 0.213 0.233 0.155 0.000 0.000 chr9 136857119 136871308
EDIL3 78 9 92 53 0 0 0.302 0.035 0.357 0.205 0.000 0.000 chr5 83935554 84389880
EDN1 225 84 31 19 1 1 0.872 0.326 0.120 0.074 0.004 0.004 chr6 12285361 12302194
EDN2 220 81 35 21 0 0 0.853 0.314 0.136 0.081 0.000 0.000 chr1 41473775 41489683
EDN3 198 70 45 26 0 0 0.767 0.271 0.174 0.101 0.000 0.000 chr20 59295611 59330992
EDNRA 139 42 95 53 0 0 0.539 0.163 0.368 0.205 0.000 0.000 chr4 147476097 147549954
EDNRB 202 74 51 28 0 0 0.783 0.287 0.198 0.109 0.000 0.000 chr13 77890487 77923831