JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
FBN3_chr19_8060402_8154592	0/0	a0120	2809	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0121	2809	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0122	2809	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0123	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0124	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0125	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0126	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0127	2809	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0128	2809	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0129	2809	1	0	0	0	1	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0130	2809	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0131	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0132	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0133	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0134	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0135	2809	1	0	0	0	1	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0136	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0137	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0138	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0139	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0140	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0141	2809	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0142	2809	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0143	2809	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0144	2809	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0145	2809	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0146	2809	1	0	0	0	0	1	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0147	2809	1	0	0	0	1	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0148	2809	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0149	2809	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0150	2809	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0151	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0152	2809	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0153	2809	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0154	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0155	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0156	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0157	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0158	2809	1	0	0	0	1	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0159	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0160	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0161	2809	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	a0162	2809	1	0	0	0	0	1	copy fasta	FBN3	chr19	8060402	8154592
FBP1_chr9_94598133_94644518	0/1	a0001	338	333	85	60	128	17	42	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	a0002	338	13	0	0	13	0	0	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	1/0	a0003	338	7	1	2	0	1	2	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	a0004	338	1	0	0	1	0	0	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	a0005	244	1	0	0	1	0	0	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	a0006	338	1	1	0	0	0	0	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	a0007	338	1	1	0	0	0	0	copy fasta	FBP1	chr9	94598133	94644518