JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
GRIN3B_chr19_995419_1014732	0/0	a0056	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0057	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0058	482	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0059	1042	1	0	1	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0060	1042	1	0	1	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0061	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0062	1042	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0063	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0064	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0065	1042	1	0	0	0	0	1	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0066	956	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0067	1043	1	0	1	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0068	1043	1	0	1	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0069	1043	1	0	0	0	1	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0070	482	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0071	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0072	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0073	1034	1	0	1	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0074	1043	1	0	0	0	0	1	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0075	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0076	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0077	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0078	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0079	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0080	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0081	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0082	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0083	1042	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0084	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0085	1043	1	0	1	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0086	1043	1	0	1	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0087	1043	1	0	1	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0088	1034	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0089	1034	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0090	1034	1	0	0	0	1	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0091	482	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0092	482	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0093	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0094	1043	1	0	0	0	0	1	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0095	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0096	1042	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0097	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0098	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0099	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0100	1043	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0101	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0102	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0103	482	1	0	0	1	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0104	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732
GRIN3B_chr19_995419_1014732	0/0	a0105	1043	1	1	0	0	0	0	copy fasta	GRIN3B	chr19	995419	1014732