JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
LILRB1_chr19_54625484_54643022	0/0	a0040	652	1	0	0	1	0	0	copy fasta	LILRB1	chr19	54625484	54643022
LILRB2_chr19_54268812_54286110	0/0	a0001	597	151	6	12	120	5	8	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0002	597	69	17	24	8	2	18	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0003	597	52	6	17	27	0	2	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/1	a0004	597	43	5	14	7	5	11	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0005	597	38	25	1	12	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0006	597	12	11	1	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0007	597	5	0	2	0	3	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0008	597	4	1	1	0	2	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0009	597	3	3	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0010	597	3	1	0	1	1	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0011	597	3	3	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0012	597	3	0	0	0	0	3	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0013	597	2	0	0	0	0	2	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0014	597	2	2	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0015	597	2	0	2	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0016	597	2	2	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0017	597	2	0	0	2	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0018	597	2	2	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0019	597	2	0	0	0	0	2	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0020	597	1	0	0	0	0	1	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0021	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0022	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0023	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0024	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0025	597	1	0	1	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0026	597	1	0	0	0	0	1	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0027	597	1	0	1	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0028	597	1	0	1	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0029	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0030	597	1	0	1	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0031	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0032	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0033	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0034	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0035	597	1	0	0	0	0	1	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0036	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0037	597	1	0	1	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0038	597	1	0	1	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0039	597	1	0	0	0	0	1	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0040	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0041	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0042	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0043	597	1	1	0	0	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0044	597	1	0	0	1	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0045	597	1	0	0	1	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0046	597	1	0	0	1	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0047	597	1	0	0	1	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB2_chr19_54268812_54286110	0/0	a0048	597	1	0	0	1	0	0	copy fasta	LILRB2	chr19	54268812	54286110
LILRB3_chr19_54211278_54228007	0/0	a0001	631	96	16	19	40	8	13	copy fasta	LILRB3	chr19	54211278	54228007