JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
MYBBP1A_chr17_4533904_4560384	0/0	a0006	1328	8	7	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0007	1328	8	7	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0008	1328	7	0	0	7	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0009	1328	6	2	1	3	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0010	1328	5	1	2	0	1	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0011	1328	4	4	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0012	1328	4	4	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0013	1328	3	2	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0014	1328	3	0	2	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0015	1328	3	1	1	0	1	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0016	1328	2	2	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0017	1328	2	0	0	0	0	2	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0018	1328	2	0	0	2	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0019	1328	2	0	2	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0020	1328	2	0	0	0	0	2	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0021	1328	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0022	1328	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0023	1328	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0024	1328	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0025	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0026	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0027	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0028	1328	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0029	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0030	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0031	1328	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0032	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0033	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0034	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0035	1328	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0036	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0037	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0038	1328	1	0	0	1	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0039	1328	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0040	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0041	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0042	1328	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0043	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0044	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0045	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0046	1328	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0047	1328	1	0	0	0	1	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0048	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0049	1328	1	0	1	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0050	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0051	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0052	1328	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0053	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0054	1328	1	1	0	0	0	0	copy fasta	MYBBP1A	chr17	4533904	4560384
MYBBP1A_chr17_4533904_4560384	0/0	a0055	1328	1	0	0	0	0	1	copy fasta	MYBBP1A	chr17	4533904	4560384