JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
MYH4_chr17_10438290_10474559	0/0	a0014	1939	2	0	2	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0015	1939	1	1	0	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0016	1939	1	0	0	1	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0017	1939	1	1	0	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0018	1939	1	0	0	0	1	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0019	1939	1	1	0	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0020	1939	1	0	1	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0021	1939	1	1	0	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0022	1939	1	1	0	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0023	1939	1	1	0	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0024	1939	1	0	0	1	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0025	1939	1	0	1	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0026	1939	1	1	0	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0027	1939	1	0	1	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH4_chr17_10438290_10474559	0/0	a0028	1939	1	1	0	0	0	0	copy fasta	MYH4	chr17	10438290	10474559
MYH6_chr14_23376987_23413273	1/1	a0001	1939	200	26	40	99	4	29	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0002	1939	82	44	14	12	4	8	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0003	1939	17	0	4	10	0	3	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0004	1939	17	4	7	1	2	3	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0005	1939	11	9	1	1	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0006	1939	11	0	6	2	3	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0007	1939	3	0	0	2	1	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0008	1939	2	2	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0009	1939	2	2	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0010	287	1	0	1	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0011	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0012	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0013	1939	1	0	0	1	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0014	1939	1	0	0	1	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0015	1939	1	0	1	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0016	1939	1	0	0	1	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0017	1939	1	0	0	1	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0018	1939	1	0	0	0	0	1	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0019	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0020	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0021	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0022	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0023	1939	1	0	0	1	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0024	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0025	1939	1	0	1	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0026	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0027	1939	1	0	0	1	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0028	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0029	1371	1	0	0	1	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0030	1939	1	0	0	1	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0031	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0032	1939	1	0	0	1	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0033	1939	1	0	1	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH6_chr14_23376987_23413273	0/0	a0034	1939	1	1	0	0	0	0	copy fasta	MYH6	chr14	23376987	23413273
MYH7B_chr20_34950868_35007437	1/1	a0001	1941	238	58	45	98	10	25	copy fasta	MYH7B	chr20	34950868	35007437