JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
MYO15A_chr17_18103756_18184800	0/0	a0052	3530	1	0	0	1	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0053	3530	1	0	0	1	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0054	3530	1	0	0	1	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0055	1104	1	0	0	1	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0056	1104	1	0	1	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0057	1104	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0058	3530	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0059	3530	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0060	3530	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0061	3530	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0062	3530	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0063	3530	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0064	3530	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0065	3530	1	0	1	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0066	3530	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0067	3530	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0068	3530	1	1	0	0	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15A_chr17_18103756_18184800	0/0	a0069	3530	1	0	0	1	0	0	copy fasta	MYO15A	chr17	18103756	18184800
MYO15B_chr17_75582800_75631849	0/0	a0001	3096	75	3	19	30	4	19	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/1	a0002	3096	38	3	7	22	2	3	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0003	474	36	13	11	8	0	4	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0004	3096	16	0	3	10	2	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0005	3078	10	0	5	5	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0006	3096	8	8	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0007	3096	7	7	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0008	3096	5	0	0	5	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0009	1189	5	3	1	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0010	3096	5	0	1	3	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0011	3096	5	0	0	3	0	2	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0012	3096	5	0	2	3	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0013	3096	4	0	1	1	0	2	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0014	3096	4	4	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0015	474	4	4	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0016	3096	4	0	0	4	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0017	3096	3	0	0	3	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0018	3096	3	0	0	0	0	3	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0019	3096	3	0	0	3	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0020	3095	3	0	0	3	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0021	3096	3	1	1	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0022	3096	3	0	1	0	2	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0023	3096	3	0	0	3	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0024	3096	3	0	1	2	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0025	3096	3	0	3	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0026	3096	3	2	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0027	3096	3	3	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0028	3096	3	3	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0029	3078	2	0	0	2	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0030	3096	2	0	2	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0031	3095	2	0	0	2	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0032	3096	2	0	0	2	0	0	copy fasta	MYO15B	chr17	75582800	75631849