JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
MYO15B_chr17_75582800_75631849	0/0	a0033	3096	2	0	0	1	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0034	3096	2	0	0	0	2	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0035	3095	2	0	2	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0036	3096	2	0	1	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0037	3096	2	0	0	1	1	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0038	3096	2	0	2	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0039	3096	2	0	0	0	2	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0040	3096	2	0	0	1	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0041	3096	2	2	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0042	3096	2	2	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	1/0	a0043	3096	2	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0044	3096	2	2	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0045	3096	2	2	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0046	1189	2	1	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0047	3096	2	0	0	2	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0048	3096	2	2	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0049	3094	2	1	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0050	474	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0051	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0052	3095	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0053	3102	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0054	3096	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0055	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0056	3078	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0057	3077	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0058	3078	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0059	3078	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0060	3078	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0061	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0062	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0063	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0064	3096	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0065	3095	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0066	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0067	3097	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0068	3096	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0069	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0070	3097	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0071	3096	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0072	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0073	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0074	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0075	3096	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0076	3095	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0077	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0078	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0079	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0080	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0081	3096	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0082	3096	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849