JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
MYO15B_chr17_75582800_75631849	0/0	a0083	3096	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0084	3096	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0085	3096	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0086	3096	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0087	3095	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0088	3096	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0089	3096	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0090	3096	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0091	474	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0092	3102	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0093	1189	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0094	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0095	3096	1	0	0	0	0	1	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0096	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0097	3096	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0098	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0099	3094	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0100	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0101	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0102	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0103	3096	1	0	0	1	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0104	1189	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0105	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0106	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0107	3096	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0108	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0109	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0110	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0111	3096	1	0	0	0	1	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0112	3096	1	0	1	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0113	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0114	1189	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0115	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0116	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0117	1189	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0118	3081	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0119	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0120	3094	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0121	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0122	1189	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0123	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO15B_chr17_75582800_75631849	0/0	a0124	3096	1	1	0	0	0	0	copy fasta	MYO15B	chr17	75582800	75631849
MYO16_chr13_108624611_109213005	1/0	a0001	1880	49	31	9	5	1	2	copy fasta	MYO16	chr13	108624611	109213005
MYO16_chr13_108624611_109213005	0/1	a0002	1880	37	14	11	7	1	3	copy fasta	MYO16	chr13	108624611	109213005
MYO16_chr13_108624611_109213005	0/0	a0003	1880	11	2	4	3	1	1	copy fasta	MYO16	chr13	108624611	109213005
MYO16_chr13_108624611_109213005	0/0	a0004	1880	8	0	2	6	0	0	copy fasta	MYO16	chr13	108624611	109213005
MYO16_chr13_108624611_109213005	0/0	a0005	1880	4	3	1	0	0	0	copy fasta	MYO16	chr13	108624611	109213005
MYO16_chr13_108624611_109213005	0/0	a0006	1880	4	4	0	0	0	0	copy fasta	MYO16	chr13	108624611	109213005
MYO16_chr13_108624611_109213005	0/0	a0007	1880	4	4	0	0	0	0	copy fasta	MYO16	chr13	108624611	109213005
MYO16_chr13_108624611_109213005	0/0	a0008	1880	4	1	1	1	1	0	copy fasta	MYO16	chr13	108624611	109213005