JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
MYO18B_chr22_25737188_26036045	0/0	a0061	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0062	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0063	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0064	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0065	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0066	2567	1	0	0	1	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0067	2567	1	0	0	0	1	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0068	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0069	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0070	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0071	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0072	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0073	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0074	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0075	2567	1	0	0	0	0	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0076	2567	1	0	1	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0077	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0078	2567	1	0	0	0	0	1	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0079	2567	1	0	1	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0080	2567	1	0	1	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0081	2567	1	1	0	0	0	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO18B_chr22_25737188_26036045	0/0	a0082	2567	1	0	0	0	1	0	copy fasta	MYO18B	chr22	25737188	26036045
MYO19_chr17_36490636_36539868	0/1	a0001	970	182	62	31	67	4	17	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0002	970	100	2	20	61	5	12	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0003	970	42	9	7	17	1	8	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0004	970	29	0	5	21	2	1	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0005	970	2	2	0	0	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0006	970	2	2	0	0	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0007	970	2	2	0	0	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0008	970	2	2	0	0	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0009	970	1	1	0	0	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0010	970	1	1	0	0	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0011	970	1	0	1	0	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0012	970	1	0	0	1	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0013	667	1	1	0	0	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0014	970	1	0	0	1	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0015	970	1	0	0	1	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0016	970	1	0	0	1	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0017	970	1	0	0	0	0	1	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0018	970	1	0	0	0	0	1	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0019	970	1	0	0	1	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO19_chr17_36490636_36539868	0/0	a0020	970	1	0	0	1	0	0	copy fasta	MYO19	chr17	36490636	36539868
MYO1A_chr12_57023517_57055129	1/1	a0001	1043	247	61	45	96	9	34	copy fasta	MYO1A	chr12	57023517	57055129
MYO1A_chr12_57023517_57055129	0/0	a0002	1043	61	14	13	26	3	5	copy fasta	MYO1A	chr12	57023517	57055129
MYO1A_chr12_57023517_57055129	0/0	a0003	1043	11	0	11	0	0	0	copy fasta	MYO1A	chr12	57023517	57055129
MYO1A_chr12_57023517_57055129	0/0	a0004	1043	7	6	1	0	0	0	copy fasta	MYO1A	chr12	57023517	57055129
MYO1A_chr12_57023517_57055129	0/0	a0005	1043	6	4	2	0	0	0	copy fasta	MYO1A	chr12	57023517	57055129
MYO1A_chr12_57023517_57055129	0/0	a0006	1043	4	0	2	0	1	1	copy fasta	MYO1A	chr12	57023517	57055129
MYO1A_chr12_57023517_57055129	0/0	a0007	1043	3	0	0	3	0	0	copy fasta	MYO1A	chr12	57023517	57055129
MYO1A_chr12_57023517_57055129	0/0	a0008	1043	2	0	0	2	0	0	copy fasta	MYO1A	chr12	57023517	57055129