JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
MYO3A_chr10_25929229_26217532	0/0	a0014	1616	2	2	0	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0015	1616	2	1	1	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0016	1616	2	2	0	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0017	1616	2	0	0	2	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0018	1616	1	1	0	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0019	1616	1	0	0	1	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0020	1616	1	1	0	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0021	1616	1	0	1	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0022	1616	1	1	0	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0023	1494	1	0	0	0	0	1	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0024	1616	1	0	1	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0025	1616	1	0	0	0	0	1	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0026	1616	1	0	0	1	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0027	1616	1	0	0	1	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0028	1616	1	0	1	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0029	1616	1	1	0	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0030	1435	1	0	0	1	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0031	1616	1	1	0	0	0	0	copy fasta	MYO3A	chr10	25929229	26217532
MYO3A_chr10_25929229_26217532	0/0	a0032	1616	1	0	0	0	0	1	copy fasta	MYO3A	chr10	25929229	26217532
MYO3B_chr2_170173147_170660167	0/0	a0001	1341	69	26	18	14	5	6	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/1	a0002	1341	20	6	1	9	1	2	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0003	1341	16	1	4	5	4	2	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0004	1341	14	2	0	8	0	4	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0005	1341	8	0	2	2	0	4	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	1/0	a0006	1341	6	5	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0007	1341	5	0	1	3	0	1	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0008	1341	5	5	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0009	1341	4	4	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0010	1341	2	0	0	2	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0011	1341	2	2	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0012	1341	2	2	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0013	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0014	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0015	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0016	1341	1	0	0	1	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0017	1341	1	0	1	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0018	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0019	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0020	1341	1	0	1	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0021	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0022	1341	1	0	0	0	0	1	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0023	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0024	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0025	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0026	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0027	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0028	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0029	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0030	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167
MYO3B_chr2_170173147_170660167	0/0	a0031	1341	1	1	0	0	0	0	copy fasta	MYO3B	chr2	170173147	170660167