JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
MYO7B_chr2_127530683_127642726	0/0	a0027	2142	1	0	0	0	0	1	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0028	2142	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0029	2142	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0030	2142	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0031	2142	1	1	0	0	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0032	2142	1	1	0	0	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0033	2142	1	0	0	0	0	1	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0034	2142	1	0	1	0	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0035	2142	1	0	0	0	0	1	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0036	2142	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0037	2142	1	0	0	0	0	1	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0038	2142	1	0	1	0	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0039	2142	1	0	0	0	0	1	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0040	2142	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0041	2142	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0042	2142	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0043	2142	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0044	2142	1	1	0	0	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0045	2142	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0046	2142	1	0	0	0	0	1	copy fasta	MYO7B	chr2	127530683	127642726
MYO7B_chr2_127530683_127642726	0/0	a0047	2142	1	0	0	1	0	0	copy fasta	MYO7B	chr2	127530683	127642726
MYO9A_chr15_71817291_72123150	0/1	a0001	2548	206	47	40	97	4	17	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0002	2548	28	0	0	28	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0003	2548	11	0	0	10	1	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0004	2548	8	3	5	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	1/0	a0005	2548	8	5	2	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0006	2548	7	3	3	0	1	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0007	2548	6	6	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0008	2548	6	6	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0009	2548	5	0	0	5	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0010	2548	3	3	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0011	2548	2	0	0	2	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0012	2548	2	0	0	1	0	1	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0013	2548	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0014	2548	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0015	2548	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0016	2548	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0017	2548	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0018	2548	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0019	2548	1	0	1	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0020	2548	1	0	1	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0021	2548	1	0	1	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0022	2548	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0023	2548	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0024	2548	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0025	2548	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0026	2548	1	1	0	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0027	2548	1	0	0	1	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9A_chr15_71817291_72123150	0/0	a0028	2548	1	0	1	0	0	0	copy fasta	MYO9A	chr15	71817291	72123150
MYO9B_chr19_17070777_17218286	0/0	a0001	2157	145	39	28	53	8	17	copy fasta	MYO9B	chr19	17070777	17218286