JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	SAS	aseq	genename	chr	start	end
NBPF10_chr1_146059711_146149804	0/0	a0018	1500	2	2	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0019	793	2	2	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0020	3795	2	0	2	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0021	1500	2	0	2	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0022	3795	2	0	0	2	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0023	1500	2	0	0	2	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0024	3795	2	0	0	2	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0025	3795	2	0	0	2	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0026	3795	2	0	0	2	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0027	3795	2	0	2	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0028	3795	2	0	2	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0029	3795	2	2	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0030	1717	2	0	2	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0031	1636	2	0	0	1	1	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0032	3526	2	0	0	2	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0033	3357	2	0	0	2	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0034	1392	2	0	1	1	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0035	3419	2	0	2	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0036	3357	2	0	2	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0037	2575	2	0	0	2	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0038	3551	2	0	0	0	2	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0039	3063	2	0	0	2	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0040	3795	2	2	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0041	2575	2	0	0	0	2	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0042	3795	1	0	0	0	1	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0043	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0044	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0045	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0046	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0047	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0048	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0049	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0050	1500	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0051	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0052	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0053	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0054	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0055	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0056	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0057	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0058	1525	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0059	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0060	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0061	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0062	1525	1	0	0	0	1	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0063	3795	1	0	0	1	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0064	3795	1	0	0	0	1	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0065	3795	1	1	0	0	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0066	374	1	0	0	1	0	copy fasta	NBPF10	chr1	146059711	146149804
NBPF10_chr1_146059711_146149804	0/0	a0067	1599	1	0	0	1	0	copy fasta	NBPF10	chr1	146059711	146149804