JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
NRAP_chr10_113583714_113669041	0/0	a0034	1730	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0035	1730	2	0	0	0	0	2	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0036	1730	2	0	0	1	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0037	1730	2	0	0	1	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0038	1730	2	0	0	2	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0039	1730	2	0	0	2	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0040	1730	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0041	1730	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0042	1730	2	0	1	0	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0043	1730	2	2	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0044	1730	2	0	0	2	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0045	1730	2	1	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0046	1730	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0047	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0048	1730	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0049	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0050	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0051	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0052	1730	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0053	1730	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0054	1730	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0055	1730	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0056	1730	1	0	0	0	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0057	1730	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0058	1730	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0059	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0060	1730	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0061	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0062	1730	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0063	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0064	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0065	1730	1	0	0	0	1	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0066	1730	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0067	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0068	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0069	1730	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0070	1730	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0071	1730	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0072	1730	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0073	1730	1	0	1	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0074	1730	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0075	1730	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0076	1730	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0077	1730	1	0	0	1	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0078	1730	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0079	1730	1	0	0	0	0	1	copy fasta	NRAP	chr10	113583714	113669041
NRAP_chr10_113583714_113669041	0/0	a0080	1730	1	1	0	0	0	0	copy fasta	NRAP	chr10	113583714	113669041
NRARP_chr9_137294631_137307271	1/1	a0001	114	357	97	70	130	16	42	copy fasta	NRARP	chr9	137294631	137307271
NRARP_chr9_137294631_137307271	0/0	a0002	114	1	1	0	0	0	0	copy fasta	NRARP	chr9	137294631	137307271
NRAS_chr1_114699469_114721771	1/1	a0001	189	376	98	68	155	14	39	copy fasta	NRAS	chr1	114699469	114721771