JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
P2RX6_chr22_21010165_21033008	0/0	a0005	441	1	1	0	0	0	0	copy fasta	P2RX6	chr22	21010165	21033008
P2RX6_chr22_21010165_21033008	0/0	a0006	441	1	0	0	0	0	1	copy fasta	P2RX6	chr22	21010165	21033008
P2RX7_chr12_121127876_121193032	0/1	a0001	595	51	9	8	25	5	3	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0002	595	44	20	5	17	1	1	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0003	595	40	2	8	29	0	1	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0004	595	39	11	5	14	3	6	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0005	595	24	10	4	8	1	1	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0006	595	24	3	12	6	0	3	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0007	595	21	4	3	7	0	7	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0008	595	19	0	1	14	1	3	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0009	595	12	0	0	12	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0010	595	10	0	4	6	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0011	595	10	8	2	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0012	595	9	1	4	0	1	3	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0013	595	8	8	0	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	1/0	a0014	595	8	0	1	4	2	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0015	595	8	3	2	2	0	1	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0016	595	5	5	0	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0017	595	4	4	0	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0018	595	3	1	0	0	0	2	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0019	595	3	3	0	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0020	595	3	0	0	0	1	2	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0021	595	3	0	1	2	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0022	595	2	2	0	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0023	595	2	0	0	0	0	2	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0024	595	2	2	0	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0025	595	1	0	0	0	0	1	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0026	530	1	0	0	1	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0027	595	1	0	1	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0028	595	1	0	0	0	1	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0029	595	1	0	0	0	0	1	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0030	595	1	0	1	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0031	595	1	1	0	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0032	595	1	1	0	0	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0033	595	1	0	0	1	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0034	595	1	0	0	1	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0035	595	1	0	0	1	0	0	copy fasta	P2RX7	chr12	121127876	121193032
P2RX7_chr12_121127876_121193032	0/0	a0036	595	1	0	0	0	0	1	copy fasta	P2RX7	chr12	121127876	121193032
P2RY10_chrX_78940391_78968727	1/1	a0001	339	225	66	44	80	11	22	copy fasta	P2RY10	chrX	78940391	78968727
P2RY10_chrX_78940391_78968727	0/0	a0002	339	94	5	14	67	0	8	copy fasta	P2RY10	chrX	78940391	78968727
P2RY10_chrX_78940391_78968727	0/0	a0003	76	1	0	0	1	0	0	copy fasta	P2RY10	chrX	78940391	78968727
P2RY10_chrX_78940391_78968727	0/0	a0004	339	1	1	0	0	0	0	copy fasta	P2RY10	chrX	78940391	78968727
P2RY10_chrX_78940391_78968727	0/0	a0005	274	1	0	0	1	0	0	copy fasta	P2RY10	chrX	78940391	78968727
P2RY11_chr19_10106693_10120372	1/0	a0001	374	343	83	69	140	15	35	copy fasta	P2RY11	chr19	10106693	10120372
P2RY11_chr19_10106693_10120372	0/1	a0002	374	92	12	7	57	3	12	copy fasta	P2RY11	chr19	10106693	10120372
P2RY11_chr19_10106693_10120372	0/0	a0003	374	5	0	4	1	0	0	copy fasta	P2RY11	chr19	10106693	10120372
P2RY11_chr19_10106693_10120372	0/0	a0004	374	3	0	0	3	0	0	copy fasta	P2RY11	chr19	10106693	10120372
P2RY11_chr19_10106693_10120372	0/0	a0005	374	2	0	2	0	0	0	copy fasta	P2RY11	chr19	10106693	10120372
P2RY11_chr19_10106693_10120372	0/0	a0006	374	1	0	1	0	0	0	copy fasta	P2RY11	chr19	10106693	10120372
P2RY11_chr19_10106693_10120372	0/0	a0007	374	1	1	0	0	0	0	copy fasta	P2RY11	chr19	10106693	10120372