| regionname | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
ahapid | alen | total | AFR | AMR | EAS | EUR | SAS | aseq | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
0/0 | a0002 | 316 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | TNFAIP1 | chr17 | 28330761 | 28352009 |
|
0/0 | a0001 | 654 | 201 | 37 | 39 | 85 | 12 | 28 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
1/1 | a0002 | 654 | 178 | 42 | 28 | 85 | 6 | 15 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0003 | 655 | 5 | 3 | 2 | 0 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0004 | 654 | 3 | 3 | 0 | 0 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0005 | 654 | 3 | 0 | 0 | 3 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0006 | 654 | 2 | 0 | 2 | 0 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0007 | 654 | 2 | 2 | 0 | 0 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0008 | 655 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0009 | 654 | 1 | 0 | 0 | 0 | 0 | 1 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0010 | 654 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0011 | 654 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0012 | 654 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0013 | 654 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0014 | 654 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
0/0 | a0015 | 654 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | TNFAIP2 | chr14 | 103118461 | 103142439 |
|
1/1 | a0001 | 790 | 282 | 56 | 56 | 123 | 11 | 34 | copy fasta | TNFAIP3 | chr6 | 137862259 | 137888312 |
|
0/0 | a0002 | 790 | 63 | 34 | 5 | 21 | 3 | 0 | copy fasta | TNFAIP3 | chr6 | 137862259 | 137888312 |
|
0/0 | a0003 | 790 | 9 | 0 | 4 | 1 | 0 | 4 | copy fasta | TNFAIP3 | chr6 | 137862259 | 137888312 |
|
0/0 | a0004 | 790 | 4 | 4 | 0 | 0 | 0 | 0 | copy fasta | TNFAIP3 | chr6 | 137862259 | 137888312 |
|
0/0 | a0005 | 790 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | TNFAIP3 | chr6 | 137862259 | 137888312 |
|
0/0 | a0006 | 790 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | TNFAIP3 | chr6 | 137862259 | 137888312 |
|
0/1 | a0000 | 0 | 185 | 29 | 23 | 100 | 9 | 23 | copy fasta | TNFAIP6 | chr2 | 151352592 | 151385046 |
|
1/0 | a0001 | 277 | 202 | 47 | 44 | 81 | 9 | 20 | copy fasta | TNFAIP6 | chr2 | 151352592 | 151385046 |
|
0/0 | a0002 | 277 | 26 | 7 | 1 | 15 | 0 | 3 | copy fasta | TNFAIP6 | chr2 | 151352592 | 151385046 |
|
0/0 | a0003 | 277 | 2 | 2 | 0 | 0 | 0 | 0 | copy fasta | TNFAIP6 | chr2 | 151352592 | 151385046 |
|
0/0 | a0004 | 277 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | TNFAIP6 | chr2 | 151352592 | 151385046 |
|
1/1 | a0001 | 186 | 414 | 97 | 78 | 183 | 16 | 38 | copy fasta | TNFAIP8L1 | chr19 | 4634516 | 4660568 |
|
0/0 | a0002 | 186 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | TNFAIP8L1 | chr19 | 4634516 | 4660568 |
|
0/0 | a0003 | 186 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | TNFAIP8L1 | chr19 | 4634516 | 4660568 |
|
1/1 | a0001 | 184 | 343 | 96 | 64 | 129 | 18 | 34 | copy fasta | TNFAIP8L2 | chr1 | 151151649 | 151164749 |
|
0/0 | a0002 | 184 | 2 | 0 | 0 | 0 | 0 | 2 | copy fasta | TNFAIP8L2 | chr1 | 151151649 | 151164749 |
|
0/0 | a0003 | 184 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | TNFAIP8L2 | chr1 | 151151649 | 151164749 |
|
0/0 | a0004 | 184 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | TNFAIP8L2 | chr1 | 151151649 | 151164749 |
|
0/0 | a0005 | 184 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | TNFAIP8L2 | chr1 | 151151649 | 151164749 |
|
1/1 | a0001 | 204 | 386 | 87 | 65 | 176 | 14 | 42 | copy fasta | TNFAIP8L3 | chr15 | 51051601 | 51099906 |
|
0/0 | a0002 | 204 | 6 | 0 | 6 | 0 | 0 | 0 | copy fasta | TNFAIP8L3 | chr15 | 51051601 | 51099906 |
|
0/0 | a0003 | 204 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | TNFAIP8L3 | chr15 | 51051601 | 51099906 |
|
0/0 | a0004 | 204 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | TNFAIP8L3 | chr15 | 51051601 | 51099906 |
|
1/1 | a0001 | 198 | 382 | 92 | 76 | 164 | 12 | 36 | copy fasta | TNFAIP8 | chr5 | 119351019 | 119404688 |
|
0/0 | a0002 | 198 | 2 | 0 | 0 | 2 | 0 | 0 | copy fasta | TNFAIP8 | chr5 | 119351019 | 119404688 |
|
0/0 | a0001 | 468 | 200 | 8 | 29 | 129 | 9 | 25 | copy fasta | TNFRSF10A | chr8 | 23185452 | 23230102 |
|
0/1 | a0002 | 468 | 65 | 35 | 18 | 0 | 3 | 8 | copy fasta | TNFRSF10A | chr8 | 23185452 | 23230102 |
|
0/0 | a0003 | 468 | 21 | 19 | 2 | 0 | 0 | 0 | copy fasta | TNFRSF10A | chr8 | 23185452 | 23230102 |
|
0/0 | a0004 | 468 | 16 | 11 | 3 | 2 | 0 | 0 | copy fasta | TNFRSF10A | chr8 | 23185452 | 23230102 |
|
0/0 | a0005 | 468 | 15 | 0 | 7 | 2 | 3 | 3 | copy fasta | TNFRSF10A | chr8 | 23185452 | 23230102 |
|
0/0 | a0006 | 468 | 9 | 9 | 0 | 0 | 0 | 0 | copy fasta | TNFRSF10A | chr8 | 23185452 | 23230102 |
|
0/0 | a0007 | 468 | 7 | 0 | 6 | 0 | 0 | 1 | copy fasta | TNFRSF10A | chr8 | 23185452 | 23230102 |
|
1/0 | a0008 | 468 | 5 | 3 | 0 | 0 | 1 | 0 | copy fasta | TNFRSF10A | chr8 | 23185452 | 23230102 |
|
0/0 | a0009 | 468 | 4 | 3 | 0 | 0 | 0 | 1 | copy fasta | TNFRSF10A | chr8 | 23185452 | 23230102 |