JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
VWF_chr12_5943877_6129670	0/0	a0031	2813	2	0	2	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0032	2813	2	2	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0033	2813	2	2	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0034	2813	2	2	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0035	2813	2	0	0	1	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0036	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0037	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0038	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0039	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0040	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0041	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0042	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0043	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0044	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0045	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0046	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0047	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0048	2813	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0049	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0050	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0051	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0052	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0053	2813	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0054	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0055	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0056	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0057	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0058	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0059	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0060	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0061	2813	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0062	2813	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0063	2813	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0064	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0065	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0066	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0067	2813	1	0	0	0	1	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0068	2813	1	0	0	0	1	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0069	2813	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0070	2813	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0071	2813	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0072	2813	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0073	2813	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0074	2813	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0075	2813	1	0	1	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0076	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0077	2813	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0078	2813	1	0	0	1	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0079	2813	1	1	0	0	0	0	copy fasta	VWF	chr12	5943877	6129670
VWF_chr12_5943877_6129670	0/0	a0080	2813	1	0	0	0	0	1	copy fasta	VWF	chr12	5943877	6129670