JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
ZNF469_chr16_88377959_88445753	0/0	a0069	3946	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0070	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0071	3953	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0072	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0073	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0074	3953	1	0	0	0	0	1	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0075	3953	1	0	0	0	1	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0076	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0077	3483	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0078	3953	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0079	3953	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0080	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0081	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0082	3953	1	0	0	0	1	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0083	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0084	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0085	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0086	3953	1	0	0	0	1	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0087	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0088	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0089	3953	1	0	0	0	0	1	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0090	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0091	3953	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0092	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0093	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0094	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0095	3953	1	0	0	0	1	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0096	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0097	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0098	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0099	3953	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0100	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0101	3953	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0102	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0103	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0104	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0105	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0106	3953	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0107	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0108	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0109	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0110	3953	1	0	0	0	0	1	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0111	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0112	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0113	3953	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0114	836	1	1	0	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0115	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0116	3953	1	0	0	0	0	1	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0117	3953	1	0	1	0	0	0	copy fasta	ZNF469	chr16	88377959	88445753
ZNF469_chr16_88377959_88445753	0/0	a0118	3953	1	0	0	1	0	0	copy fasta	ZNF469	chr16	88377959	88445753