Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
ZNF700_chr19_11920107_11955763	0/0	a0011	742	1	1	0	0	0	0	copy fasta	ZNF700	chr19	11920107	11955763
ZNF700_chr19_11920107_11955763	0/0	a0012	579	1	0	0	1	0	0	copy fasta	ZNF700	chr19	11920107	11955763
ZNF700_chr19_11920107_11955763	0/0	a0013	742	1	0	1	0	0	0	copy fasta	ZNF700	chr19	11920107	11955763
ZNF700_chr19_11920107_11955763	0/0	a0014	742	1	1	0	0	0	0	copy fasta	ZNF700	chr19	11920107	11955763
ZNF701_chr19_52565287_52592174	1/0	a0001	465	143	3	29	92	2	16	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	a0002	465	139	53	31	38	5	12	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/1	a0003	465	107	6	19	59	8	14	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	a0004	465	36	27	5	3	1	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	a0005	465	15	0	0	15	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	a0006	465	8	4	0	3	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	a0007	465	2	2	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	a0008	465	2	2	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	a0009	465	1	0	0	0	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	a0010	255	1	0	0	0	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	a0011	178	1	1	0	0	0	0	copy fasta	ZNF701	chr19	52565287	52592174
ZNF701_chr19_52565287_52592174	0/0	a0012	38	1	0	0	0	0	1	copy fasta	ZNF701	chr19	52565287	52592174
ZNF703_chr8_37690782_37705019	1/1	a0001	590	260	83	50	80	16	29	copy fasta	ZNF703	chr8	37690782	37705019
ZNF703_chr8_37690782_37705019	0/0	a0002	591	3	1	0	1	0	1	copy fasta	ZNF703	chr8	37690782	37705019
ZNF703_chr8_37690782_37705019	0/0	a0003	604	2	0	1	1	0	0	copy fasta	ZNF703	chr8	37690782	37705019
ZNF703_chr8_37690782_37705019	0/0	a0004	590	1	0	0	1	0	0	copy fasta	ZNF703	chr8	37690782	37705019
ZNF703_chr8_37690782_37705019	0/0	a0005	590	1	0	0	1	0	0	copy fasta	ZNF703	chr8	37690782	37705019
ZNF703_chr8_37690782_37705019	0/0	a0006	590	1	0	1	0	0	0	copy fasta	ZNF703	chr8	37690782	37705019
ZNF704_chr8_80623451_80879781	1/1	a0001	412	71	26	17	7	6	13	copy fasta	ZNF704	chr8	80623451	80879781
ZNF704_chr8_80623451_80879781	0/0	a0002	412	47	34	9	1	2	1	copy fasta	ZNF704	chr8	80623451	80879781
ZNF705A_chr12_8152015_8185046	0/0	a0001	300	195	32	38	100	5	20	copy fasta	ZNF705A	chr12	8152015	8185046
ZNF705A_chr12_8152015_8185046	1/1	a0002	300	183	28	35	89	5	24	copy fasta	ZNF705A	chr12	8152015	8185046
ZNF705A_chr12_8152015_8185046	0/0	a0003	300	22	20	1	1	0	0	copy fasta	ZNF705A	chr12	8152015	8185046
ZNF705A_chr12_8152015_8185046	0/0	a0004	300	6	6	0	0	0	0	copy fasta	ZNF705A	chr12	8152015	8185046
ZNF705A_chr12_8152015_8185046	0/0	a0005	300	5	2	0	0	0	3	copy fasta	ZNF705A	chr12	8152015	8185046
ZNF705A_chr12_8152015_8185046	0/0	a0006	300	3	3	0	0	0	0	copy fasta	ZNF705A	chr12	8152015	8185046
ZNF705A_chr12_8152015_8185046	0/0	a0007	300	2	0	0	2	0	0	copy fasta	ZNF705A	chr12	8152015	8185046
ZNF705A_chr12_8152015_8185046	0/0	a0008	300	2	2	0	0	0	0	copy fasta	ZNF705A	chr12	8152015	8185046
ZNF705A_chr12_8152015_8185046	0/0	a0009	300	1	0	0	0	0	1	copy fasta	ZNF705A	chr12	8152015	8185046
ZNF705A_chr12_8152015_8185046	0/0	a0010	300	1	1	0	0	0	0	copy fasta	ZNF705A	chr12	8152015	8185046
ZNF705B_chr8_7921337_7957413	0/0	a0001	300	35	6	6	13	2	8	copy fasta	ZNF705B	chr8	7921337	7957413
ZNF705B_chr8_7921337_7957413	0/0	a0002	300	24	0	5	13	2	4	copy fasta	ZNF705B	chr8	7921337	7957413
ZNF705B_chr8_7921337_7957413	0/0	a0003	300	8	2	2	0	2	2	copy fasta	ZNF705B	chr8	7921337	7957413
ZNF705B_chr8_7921337_7957413	0/0	a0004	300	6	4	0	0	0	2	copy fasta	ZNF705B	chr8	7921337	7957413
ZNF705B_chr8_7921337_7957413	0/0	a0005	300	4	3	1	0	0	0	copy fasta	ZNF705B	chr8	7921337	7957413
ZNF705B_chr8_7921337_7957413	0/0	a0006	300	2	0	0	2	0	0	copy fasta	ZNF705B	chr8	7921337	7957413
ZNF705B_chr8_7921337_7957413	0/0	a0007	300	1	0	0	0	1	0	copy fasta	ZNF705B	chr8	7921337	7957413
ZNF705B_chr8_7921337_7957413	0/0	a0008	300	1	1	0	0	0	0	copy fasta	ZNF705B	chr8	7921337	7957413
ZNF705B_chr8_7921337_7957413	0/0	a0009	300	1	0	0	0	1	0	copy fasta	ZNF705B	chr8	7921337	7957413
ZNF705D_chr8_12084338_12120516	0/1	a0001	300	4	3	0	0	0	0	copy fasta	ZNF705D	chr8	12084338	12120516
ZNF705D_chr8_12084338_12120516	0/0	a0002	300	1	1	0	0	0	0	copy fasta	ZNF705D	chr8	12084338	12120516
ZNF705G_chr8_7350517_7390558	1/1	a0001	300	176	21	21	103	8	21	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF705G_chr8_7350517_7390558	0/0	a0002	300	69	8	11	33	2	15	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF705G_chr8_7350517_7390558	0/0	a0003	300	12	1	5	4	2	0	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF705G_chr8_7350517_7390558	0/0	a0004	300	6	6	0	0	0	0	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF705G_chr8_7350517_7390558	0/0	a0005	300	5	0	0	5	0	0	copy fasta	ZNF705G	chr8	7350517	7390558