Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
ZNF705G_chr8_7350517_7390558	0/0	a0006	300	3	3	0	0	0	0	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF705G_chr8_7350517_7390558	0/0	a0007	300	3	3	0	0	0	0	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF705G_chr8_7350517_7390558	0/0	a0008	300	2	2	0	0	0	0	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF705G_chr8_7350517_7390558	0/0	a0009	300	1	0	0	1	0	0	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF705G_chr8_7350517_7390558	0/0	a0010	300	1	1	0	0	0	0	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF705G_chr8_7350517_7390558	0/0	a0011	300	1	0	1	0	0	0	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF705G_chr8_7350517_7390558	0/0	a0012	300	1	1	0	0	0	0	copy fasta	ZNF705G	chr8	7350517	7390558
ZNF706_chr8_101192052_101210673	1/1	a0001	76	369	92	70	157	10	38	copy fasta	ZNF706	chr8	101192052	101210673
ZNF706_chr8_101192052_101210673	0/0	a0002	76	1	0	0	1	0	0	copy fasta	ZNF706	chr8	101192052	101210673
ZNF707_chr8_143679479_143700385	0/0	a0001	371	233	49	30	139	3	12	copy fasta	ZNF707	chr8	143679479	143700385
ZNF707_chr8_143679479_143700385	0/1	a0002	371	196	44	54	50	11	36	copy fasta	ZNF707	chr8	143679479	143700385
ZNF707_chr8_143679479_143700385	0/0	a0003	371	2	2	0	0	0	0	copy fasta	ZNF707	chr8	143679479	143700385
ZNF707_chr8_143679479_143700385	0/0	a0004	371	1	0	0	1	0	0	copy fasta	ZNF707	chr8	143679479	143700385
ZNF707_chr8_143679479_143700385	0/0	a0005	371	1	0	0	1	0	0	copy fasta	ZNF707	chr8	143679479	143700385
ZNF707_chr8_143679479_143700385	0/0	a0006	371	1	1	0	0	0	0	copy fasta	ZNF707	chr8	143679479	143700385
ZNF707_chr8_143679479_143700385	0/0	a0007	371	1	0	0	1	0	0	copy fasta	ZNF707	chr8	143679479	143700385
ZNF708_chr19_21286160_21334410	0/0	a0001	563	169	52	29	65	4	19	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	1/0	a0002	563	62	1	4	49	2	5	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0003	563	54	9	17	19	2	7	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/1	a0004	563	30	1	13	6	4	5	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0005	563	7	6	1	0	0	0	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0006	563	7	6	1	0	0	0	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0007	563	4	2	2	0	0	0	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0008	563	2	2	0	0	0	0	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0009	563	2	2	0	0	0	0	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0010	563	2	2	0	0	0	0	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0011	535	2	0	2	0	0	0	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0012	563	1	0	0	0	0	1	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0013	563	1	0	0	0	0	1	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0014	514	1	0	0	1	0	0	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0015	563	1	0	1	0	0	0	copy fasta	ZNF708	chr19	21286160	21334410
ZNF708_chr19_21286160_21334410	0/0	a0016	563	1	1	0	0	0	0	copy fasta	ZNF708	chr19	21286160	21334410
ZNF709_chr19_12456184_12489816	1/1	a0001	641	359	96	59	158	10	34	copy fasta	ZNF709	chr19	12456184	12489816
ZNF709_chr19_12456184_12489816	0/0	a0002	641	1	0	1	0	0	0	copy fasta	ZNF709	chr19	12456184	12489816
ZNF70_chr22_23733682_23756112	1/1	a0001	446	415	91	80	180	16	46	copy fasta	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	a0002	446	4	0	0	4	0	0	copy fasta	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	a0003	446	3	0	3	0	0	0	copy fasta	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	a0004	446	2	2	0	0	0	0	copy fasta	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	a0005	446	1	1	0	0	0	0	copy fasta	ZNF70	chr22	23733682	23756112
ZNF70_chr22_23733682_23756112	0/0	a0006	446	1	0	1	0	0	0	copy fasta	ZNF70	chr22	23733682	23756112
ZNF710_chr15_89996324_90087191	1/1	a0001	664	267	79	56	86	10	34	copy fasta	ZNF710	chr15	89996324	90087191
ZNF710_chr15_89996324_90087191	0/0	a0002	664	10	9	1	0	0	0	copy fasta	ZNF710	chr15	89996324	90087191
ZNF710_chr15_89996324_90087191	0/0	a0003	664	2	0	0	0	2	0	copy fasta	ZNF710	chr15	89996324	90087191
ZNF710_chr15_89996324_90087191	0/0	a0004	664	1	1	0	0	0	0	copy fasta	ZNF710	chr15	89996324	90087191
ZNF710_chr15_89996324_90087191	0/0	a0005	664	1	1	0	0	0	0	copy fasta	ZNF710	chr15	89996324	90087191
ZNF710_chr15_89996324_90087191	0/0	a0006	664	1	0	1	0	0	0	copy fasta	ZNF710	chr15	89996324	90087191
ZNF711_chrX_85238991_85278357	1/1	a0001	807	271	74	35	125	7	28	copy fasta	ZNF711	chrX	85238991	85278357
ZNF711_chrX_85238991_85278357	0/0	a0002	20	1	0	0	1	0	0	copy fasta	ZNF711	chrX	85238991	85278357
ZNF711_chrX_85238991_85278357	0/0	a0003	807	1	0	1	0	0	0	copy fasta	ZNF711	chrX	85238991	85278357
ZNF711_chrX_85238991_85278357	0/0	a0004	165	1	0	0	1	0	0	copy fasta	ZNF711	chrX	85238991	85278357