Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
ZNF749_chr19_57430325_57452101	0/1	a0001	778	273	52	49	132	8	31	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0002	778	69	13	22	22	6	6	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	1/0	a0003	778	62	10	9	32	3	7	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0004	751	11	0	1	10	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0005	778	6	1	0	2	0	3	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0006	778	4	4	0	0	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0007	778	3	0	0	3	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0008	778	3	1	2	0	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0009	778	3	3	0	0	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0010	778	2	0	0	2	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0011	778	2	0	0	1	1	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0012	778	2	2	0	0	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0013	778	2	2	0	0	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0014	383	1	0	1	0	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0015	778	1	0	0	1	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0016	778	1	0	0	0	0	1	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0017	778	1	0	0	1	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0018	778	1	0	0	1	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0019	778	1	1	0	0	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0020	778	1	1	0	0	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0021	778	1	0	0	1	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0022	778	1	0	0	1	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF749_chr19_57430325_57452101	0/0	a0023	751	1	0	0	1	0	0	copy fasta	ZNF749	chr19	57430325	57452101
ZNF74_chr22_20389151_20413455	1/1	a0001	644	339	93	63	123	17	41	copy fasta	ZNF74	chr22	20389151	20413455
ZNF74_chr22_20389151_20413455	0/0	a0002	644	47	0	0	46	0	1	copy fasta	ZNF74	chr22	20389151	20413455
ZNF74_chr22_20389151_20413455	0/0	a0003	644	26	0	5	21	0	0	copy fasta	ZNF74	chr22	20389151	20413455
ZNF74_chr22_20389151_20413455	0/0	a0004	644	2	0	0	2	0	0	copy fasta	ZNF74	chr22	20389151	20413455
ZNF74_chr22_20389151_20413455	0/0	a0005	644	2	0	2	0	0	0	copy fasta	ZNF74	chr22	20389151	20413455
ZNF74_chr22_20389151_20413455	0/0	a0006	644	2	0	0	2	0	0	copy fasta	ZNF74	chr22	20389151	20413455
ZNF74_chr22_20389151_20413455	0/0	a0007	644	1	0	0	0	1	0	copy fasta	ZNF74	chr22	20389151	20413455
ZNF74_chr22_20389151_20413455	0/0	a0008	644	1	0	0	1	0	0	copy fasta	ZNF74	chr22	20389151	20413455
ZNF74_chr22_20389151_20413455	0/0	a0009	644	1	1	0	0	0	0	copy fasta	ZNF74	chr22	20389151	20413455
ZNF74_chr22_20389151_20413455	0/0	a0010	644	1	0	0	1	0	0	copy fasta	ZNF74	chr22	20389151	20413455
ZNF750_chr17_82824434_82845022	1/1	a0001	723	348	72	55	161	16	42	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0002	723	48	10	20	16	2	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0003	723	10	8	2	0	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0004	723	4	4	0	0	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0005	723	4	0	4	0	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0006	723	3	0	0	3	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0007	723	2	2	0	0	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0008	723	2	0	0	2	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0009	723	1	1	0	0	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0010	723	1	0	0	1	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0011	723	1	0	0	1	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0012	723	1	1	0	0	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF750_chr17_82824434_82845022	0/0	a0013	723	1	0	1	0	0	0	copy fasta	ZNF750	chr17	82824434	82845022
ZNF75A_chr16_3300497_3323851	1/1	a0001	537	361	84	58	164	13	40	copy fasta	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	a0002	537	29	3	14	6	3	3	copy fasta	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	a0003	537	9	9	0	0	0	0	copy fasta	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	a0004	537	2	0	0	0	0	2	copy fasta	ZNF75A	chr16	3300497	3323851