Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
ZNF75A_chr16_3300497_3323851	0/0	a0005	537	1	0	0	1	0	0	copy fasta	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	a0006	537	1	0	0	1	0	0	copy fasta	ZNF75A	chr16	3300497	3323851
ZNF75A_chr16_3300497_3323851	0/0	a0007	537	1	0	0	0	0	1	copy fasta	ZNF75A	chr16	3300497	3323851
ZNF75D_chrX_135280791_135349109	1/1	a0001	510	270	65	49	123	7	24	copy fasta	ZNF75D	chrX	135280791	135349109
ZNF75D_chrX_135280791_135349109	0/0	a0002	510	1	1	0	0	0	0	copy fasta	ZNF75D	chrX	135280791	135349109
ZNF75D_chrX_135280791_135349109	0/0	a0003	510	1	0	0	1	0	0	copy fasta	ZNF75D	chrX	135280791	135349109
ZNF761_chr19_53426984_53463261	0/1	a0001	746	161	36	41	55	10	18	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	1/0	a0002	746	124	12	13	85	3	10	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0003	746	67	19	15	26	2	5	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0004	746	47	16	7	16	3	5	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0005	746	31	2	1	26	0	2	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0006	746	9	7	0	0	0	2	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0007	746	6	0	0	6	0	0	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0008	746	4	2	2	0	0	0	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0009	746	2	0	0	2	0	0	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0010	746	1	1	0	0	0	0	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0011	746	1	1	0	0	0	0	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0012	746	1	0	0	0	0	1	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0013	746	1	0	0	0	0	1	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0014	746	1	1	0	0	0	0	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0015	746	1	1	0	0	0	0	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0016	746	1	0	0	1	0	0	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0017	746	1	0	0	1	0	0	copy fasta	ZNF761	chr19	53426984	53463261
ZNF761_chr19_53426984_53463261	0/0	a0018	746	1	0	1	0	0	0	copy fasta	ZNF761	chr19	53426984	53463261
ZNF763_chr19_11960040_11985617	1/1	a0001	394	363	85	66	157	16	37	copy fasta	ZNF763	chr19	11960040	11985617
ZNF763_chr19_11960040_11985617	0/0	a0002	394	7	5	2	0	0	0	copy fasta	ZNF763	chr19	11960040	11985617
ZNF763_chr19_11960040_11985617	0/0	a0003	394	6	3	2	0	0	1	copy fasta	ZNF763	chr19	11960040	11985617
ZNF763_chr19_11960040_11985617	0/0	a0004	394	2	0	0	2	0	0	copy fasta	ZNF763	chr19	11960040	11985617
ZNF763_chr19_11960040_11985617	0/0	a0005	394	1	1	0	0	0	0	copy fasta	ZNF763	chr19	11960040	11985617
ZNF763_chr19_11960040_11985617	0/0	a0006	394	1	0	0	0	0	1	copy fasta	ZNF763	chr19	11960040	11985617
ZNF763_chr19_11960040_11985617	0/0	a0007	394	1	1	0	0	0	0	copy fasta	ZNF763	chr19	11960040	11985617
ZNF763_chr19_11960040_11985617	0/0	a0008	394	1	0	0	1	0	0	copy fasta	ZNF763	chr19	11960040	11985617
ZNF763_chr19_11960040_11985617	0/0	a0009	394	1	1	0	0	0	0	copy fasta	ZNF763	chr19	11960040	11985617
ZNF763_chr19_11960040_11985617	0/0	a0010	394	1	0	0	0	0	1	copy fasta	ZNF763	chr19	11960040	11985617
ZNF764_chr16_30548764_30563374	1/0	a0001	407	325	92	58	129	14	31	copy fasta	ZNF764	chr16	30548764	30563374
ZNF764_chr16_30548764_30563374	0/0	a0002	407	11	0	7	0	1	3	copy fasta	ZNF764	chr16	30548764	30563374
ZNF764_chr16_30548764_30563374	0/1	a0003	407	3	0	0	0	2	0	copy fasta	ZNF764	chr16	30548764	30563374
ZNF764_chr16_30548764_30563374	0/0	a0004	407	2	0	0	0	0	2	copy fasta	ZNF764	chr16	30548764	30563374
ZNF764_chr16_30548764_30563374	0/0	a0005	407	1	0	0	0	1	0	copy fasta	ZNF764	chr16	30548764	30563374
ZNF764_chr16_30548764_30563374	0/0	a0006	407	1	0	1	0	0	0	copy fasta	ZNF764	chr16	30548764	30563374
ZNF764_chr16_30548764_30563374	0/0	a0007	407	1	0	0	1	0	0	copy fasta	ZNF764	chr16	30548764	30563374
ZNF764_chr16_30548764_30563374	0/0	a0008	407	1	0	0	1	0	0	copy fasta	ZNF764	chr16	30548764	30563374
ZNF764_chr16_30548764_30563374	0/0	a0009	407	1	0	0	0	0	1	copy fasta	ZNF764	chr16	30548764	30563374
ZNF764_chr16_30548764_30563374	0/0	a0010	407	1	0	0	1	0	0	copy fasta	ZNF764	chr16	30548764	30563374
ZNF764_chr16_30548764_30563374	0/0	a0011	407	1	0	0	0	0	1	copy fasta	ZNF764	chr16	30548764	30563374
ZNF765_chr19_53390149_53417009	0/1	a0001	523	285	47	64	130	12	31	copy fasta	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	1/0	a0002	523	145	32	13	82	4	13	copy fasta	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	a0003	523	6	6	0	0	0	0	copy fasta	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	a0004	523	5	5	0	0	0	0	copy fasta	ZNF765	chr19	53390149	53417009
ZNF765_chr19_53390149_53417009	0/0	a0005	523	2	2	0	0	0	0	copy fasta	ZNF765	chr19	53390149	53417009