Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
ADAMTS12_chr5_33518535_33896990	0/0	a0007	1594	4	0	1	2	0	1	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0008	1594	2	2	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0009	1594	2	1	1	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0010	1594	2	0	0	0	2	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0011	1594	2	2	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0012	1594	2	2	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0013	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0014	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0015	1594	1	0	0	0	0	1	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0016	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0017	1594	1	0	0	1	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0018	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0019	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0020	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0021	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0022	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0023	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0024	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0025	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0026	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0027	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0028	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0029	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0030	1594	1	0	0	1	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0031	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	a0032	1594	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS13_chr9_133417367_133464386	1/1	a0001	1371	191	48	22	89	10	20	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0002	1371	75	4	32	22	3	14	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0003	1371	18	9	5	1	2	1	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0004	1371	10	10	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0005	1371	8	0	0	8	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0006	1371	7	0	0	7	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0007	1371	6	0	6	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0008	1371	5	0	0	5	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0009	1371	5	1	1	0	1	2	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0010	1371	4	4	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0011	1371	4	0	0	4	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0012	1371	4	3	1	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0013	1371	3	0	2	0	0	1	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0014	1371	3	3	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0015	1371	2	2	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0016	1371	2	2	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0017	1371	2	0	2	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0018	1371	2	0	2	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0019	1371	2	0	0	0	0	2	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0020	1371	1	0	0	1	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0021	1371	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0022	1371	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0023	1371	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	a0024	1371	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386