JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
CUBN_chr10_16818966_17134811	0/0	a0026	3623	1	0	1	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0027	3623	1	0	0	0	0	1	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0028	3623	1	0	0	1	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	1/0	a0029	3623	1	0	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0030	3623	1	0	1	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0031	3623	1	0	0	0	0	1	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0032	3623	1	0	1	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0033	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0034	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0035	3623	1	0	0	1	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0036	3623	1	0	0	1	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0037	3623	1	0	0	0	1	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0038	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0039	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0040	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0041	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0042	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0043	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0044	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0045	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0046	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0047	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0048	3623	1	0	0	1	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0049	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0050	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0051	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0052	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0053	3623	1	0	1	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0054	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0055	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0056	3623	1	0	1	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0057	3623	1	0	0	0	0	1	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0058	3623	1	0	0	0	0	1	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0059	3623	1	0	1	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0060	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0061	3623	1	0	0	0	0	1	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0062	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0063	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0064	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0065	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0066	3623	1	0	0	0	0	1	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0067	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0068	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0069	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0070	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0071	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0072	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/1	a0073	3623	1	0	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0074	3623	1	0	1	0	0	0	copy fasta	CUBN	chr10	16818966	17134811
CUBN_chr10_16818966_17134811	0/0	a0075	3623	1	1	0	0	0	0	copy fasta	CUBN	chr10	16818966	17134811