JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
DNAH10_chr12_123757301_123940714	0/0	a0036	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0037	4589	1	0	1	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0038	4589	1	0	1	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0039	4589	1	0	0	0	0	1	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0040	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0041	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0042	4589	1	0	0	0	0	1	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0043	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0044	4589	1	0	0	1	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0045	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0046	4589	1	0	0	0	0	1	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0047	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0048	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0049	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0050	4589	1	0	0	0	0	1	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0051	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0052	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0053	4589	1	0	0	0	1	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0054	4589	1	0	1	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0055	4589	1	0	1	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0056	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0057	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0058	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0059	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0060	4589	1	0	0	0	0	1	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0061	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0062	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0063	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0064	4589	1	0	1	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0065	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0066	4589	1	0	1	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0067	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0068	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0069	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0070	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0071	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0072	4589	1	1	0	0	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH10_chr12_123757301_123940714	0/0	a0073	4589	1	0	0	1	0	0	copy fasta	DNAH10	chr12	123757301	123940714
DNAH11_chr7_21538039_21906839	0/1	a0001	4516	5	0	4	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0002	4516	5	0	0	5	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0003	4516	5	1	3	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0004	4516	5	0	2	3	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0005	4516	4	1	0	3	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0006	4516	4	1	0	3	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0007	4516	4	1	0	3	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0008	4516	4	0	1	3	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0009	4516	4	2	0	2	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0010	4516	3	2	0	0	0	1	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0011	4516	3	1	0	0	0	2	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0012	4516	3	1	0	2	0	0	copy fasta	DNAH11	chr7	21538039	21906839