JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
DNAH11_chr7_21538039_21906839	0/0	a0063	4516	1	0	0	0	0	1	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0064	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0065	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0066	4516	1	0	1	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0067	4516	1	0	0	0	0	1	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0068	4516	1	0	1	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0069	4516	1	0	1	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0070	4516	1	0	0	0	0	1	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0071	4516	1	0	1	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0072	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0073	4516	1	0	0	0	0	1	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0074	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0075	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0076	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0077	4516	1	0	1	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0078	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0079	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0080	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0081	4516	1	0	0	0	1	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0082	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0083	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0084	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0085	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0086	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0087	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0088	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0089	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0090	4516	1	0	0	0	1	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0091	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0092	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0093	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0094	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0095	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0096	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0097	4516	1	0	1	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0098	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0099	4516	1	0	0	0	0	1	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0100	4516	1	0	0	0	0	1	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0101	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0102	4516	1	0	1	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0103	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0104	4516	1	0	0	0	0	1	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0105	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0106	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0107	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0108	4516	1	1	0	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0109	4516	1	0	1	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0110	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0111	4516	1	0	0	1	0	0	copy fasta	DNAH11	chr7	21538039	21906839
DNAH11_chr7_21538039_21906839	0/0	a0112	4516	1	0	1	0	0	0	copy fasta	DNAH11	chr7	21538039	21906839