JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
DNAH14_chr1_224924675_225404286	0/0	a0062	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0063	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0064	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0065	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0066	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0067	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0068	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0069	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0070	4617	1	0	1	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0071	4617	1	0	1	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0072	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0073	4617	1	0	1	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0074	4617	1	0	1	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0075	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0076	4617	1	0	0	0	0	1	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0077	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0078	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0079	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0080	4617	1	0	0	0	0	1	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0081	4617	1	0	1	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0082	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0083	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0084	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0085	4617	1	0	0	0	0	1	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0086	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0087	4617	1	0	0	0	0	1	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0088	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0089	4617	1	0	0	0	0	1	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0090	4617	1	0	0	0	1	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0091	4617	1	0	0	0	0	1	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0092	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0093	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0094	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0095	4617	1	0	1	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0096	4617	1	0	1	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0097	4617	1	0	0	0	1	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0098	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0099	4617	1	0	1	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0100	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0101	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0102	1800	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0103	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0104	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0105	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0106	4617	1	0	0	0	0	1	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/1	a0107	4617	1	0	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0108	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0109	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0110	4617	1	0	0	1	0	0	copy fasta	DNAH14	chr1	224924675	225404286
DNAH14_chr1_224924675_225404286	0/0	a0111	4617	1	1	0	0	0	0	copy fasta	DNAH14	chr1	224924675	225404286