JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
DNAH8_chr6_38710311_39035792	0/0	a0010	4707	10	0	0	8	0	2	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0011	4707	6	2	1	1	0	2	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0012	4707	5	4	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0013	4707	4	0	0	0	2	2	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0014	4707	4	0	4	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0015	4707	4	4	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0016	4707	4	3	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0017	4707	3	0	0	2	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0018	4707	3	3	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0019	4707	3	1	0	2	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0020	4707	2	0	0	2	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0021	4707	2	0	2	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0022	4707	2	1	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0023	4707	2	2	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0024	4707	2	0	0	2	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0025	4707	2	2	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0026	4707	2	2	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0027	4707	2	2	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0028	4707	2	2	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0029	4707	2	0	0	2	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0030	4707	2	0	0	2	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0031	4707	2	0	0	2	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0032	4707	2	2	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0033	4707	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0034	4707	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0035	4707	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0036	4707	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0037	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0038	4707	1	0	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0039	4707	1	0	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0040	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0041	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0042	4707	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0043	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0044	4707	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0045	4707	1	0	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0046	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0047	4707	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0048	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0049	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0050	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0051	4707	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0052	4707	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0053	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0054	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0055	4707	1	0	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0056	4707	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0057	4707	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0058	4707	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	a0059	4707	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792