JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ahapid	alen	total	AFR	AMR	EAS	EUR	SAS	aseq	genename	chr	start	end
DOCK8_chr9_209865_470255	0/0	a0005	2099	9	2	2	4	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0006	2099	8	0	4	0	1	3	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0007	2099	7	4	2	0	1	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0008	2099	7	3	2	1	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0009	2099	6	2	1	1	1	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0010	2099	4	3	0	0	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0011	2099	4	3	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0012	2099	4	2	0	2	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0013	2099	3	3	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0014	2099	3	3	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0015	2099	3	3	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0016	2099	2	2	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0017	2099	2	0	0	2	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0018	2099	2	0	0	0	0	2	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0019	2099	2	2	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0020	2099	2	0	2	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0021	2099	2	2	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0022	2099	2	2	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0023	2099	2	0	2	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0024	2099	2	0	2	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0025	2099	2	0	1	0	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0026	2099	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0027	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0028	2099	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0029	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0030	2099	1	0	0	0	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0031	2099	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0032	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0033	2099	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0034	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0035	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0036	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0037	2099	1	0	0	1	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0038	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0039	2099	1	0	0	0	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0040	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0041	2099	1	0	0	1	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0042	2099	1	0	0	0	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0043	2099	1	0	0	1	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0044	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0045	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0046	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0047	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0048	2099	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0049	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0050	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0051	2099	1	0	0	0	1	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0052	2099	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0053	2099	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	a0054	2099	1	0	0	1	0	0	copy fasta	DOCK8	chr9	209865	470255