Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
ADAMTS12_chr5_33518535_33896990	0/0	c0040	4785	1	0	0	0	0	1	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0041	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0042	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0043	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0044	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0045	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0046	4785	1	0	0	0	0	1	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0047	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0048	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0049	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0050	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0051	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0052	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0053	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0054	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0055	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0056	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0057	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0058	4785	1	0	0	1	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0059	4785	1	0	0	0	0	1	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0060	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0061	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS12_chr5_33518535_33896990	0/0	c0062	4785	1	1	0	0	0	0	copy fasta	ADAMTS12	chr5	33518535	33896990
ADAMTS13_chr9_133417367_133464386	1/1	c0001	4116	159	31	20	82	7	17	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0002	4116	60	0	27	18	3	12	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0003	4116	11	4	3	1	2	1	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0004	4116	9	9	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0005	4116	9	9	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0006	4116	9	2	3	2	0	2	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0007	4116	8	0	0	8	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0008	4116	7	0	0	7	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0009	4116	6	0	6	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0010	4116	5	2	1	0	1	1	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0011	4116	5	0	0	4	0	1	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0012	4116	5	0	0	5	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0013	4116	5	1	1	0	1	2	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0014	4116	4	0	0	4	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0015	4116	4	4	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0016	4116	3	0	2	0	0	1	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0017	4116	3	3	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0018	4116	3	3	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0019	4116	2	2	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0020	4116	2	2	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0021	4116	2	2	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0022	4116	2	0	2	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0023	4116	2	2	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0024	4116	2	0	2	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0025	4116	2	0	0	0	0	2	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0026	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0027	4116	1	0	1	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386