Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
ADAMTS13_chr9_133417367_133464386	0/0	c0028	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0029	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0030	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0031	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0032	4116	1	0	1	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0033	4116	1	0	1	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0034	4116	1	0	0	0	1	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0035	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0036	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0037	4116	1	0	1	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0038	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0039	4116	1	0	0	1	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0040	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0041	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0042	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0043	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0044	4116	1	0	0	1	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0045	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0046	4116	1	0	0	0	0	1	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0047	4116	1	0	0	1	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0048	4116	1	0	0	1	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0049	4116	1	0	1	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0050	4116	1	0	0	0	1	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0051	4116	1	0	0	1	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0052	4116	1	0	1	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0053	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0054	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0055	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0056	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0057	4116	1	0	0	1	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0058	4116	1	0	0	1	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0059	4116	1	1	0	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS13_chr9_133417367_133464386	0/0	c0060	4116	1	0	1	0	0	0	copy fasta	ADAMTS13	chr9	133417367	133464386
ADAMTS14_chr10_70667506_70767441	0/0	c0001	3672	52	2	6	37	2	5	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0002	3672	45	4	8	24	7	2	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0003	3672	21	6	6	7	0	2	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/1	c0004	3672	18	1	0	12	2	2	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0005	3672	16	11	3	2	0	0	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0006	3672	12	1	3	6	0	2	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0007	3672	12	2	4	1	0	5	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0008	3672	7	0	0	6	0	1	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0009	3672	6	0	1	0	1	4	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0010	3672	6	1	3	1	0	1	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0011	3672	6	0	0	6	0	0	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0012	3672	5	0	1	0	0	4	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0013	3672	5	0	3	2	0	0	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0014	3672	5	0	0	5	0	0	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0015	3672	5	0	2	1	1	1	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0016	3672	5	3	0	2	0	0	copy fasta	ADAMTS14	chr10	70667506	70767441
ADAMTS14_chr10_70667506_70767441	0/0	c0017	3672	4	1	2	0	0	1	copy fasta	ADAMTS14	chr10	70667506	70767441