Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
ADAMTS7_chr15_78754206_78816464	0/0	c0017	5061	4	0	0	4	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0018	5058	4	4	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0019	5061	4	2	0	2	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0020	5061	3	3	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0021	5061	3	3	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0022	5061	3	0	0	3	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0023	5061	3	3	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0024	5058	3	1	2	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0025	5061	3	0	1	0	0	2	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0026	5061	3	3	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0027	5061	3	0	0	3	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0028	5061	2	0	0	2	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0029	5061	2	2	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0030	5061	2	0	0	2	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0031	5061	2	0	0	0	0	2	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0032	5061	2	2	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0033	5061	2	0	0	2	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0034	5061	2	0	0	2	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0035	5058	2	2	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0036	5061	2	2	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0037	5061	2	1	1	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0038	5061	2	0	0	2	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0039	5061	2	0	0	2	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0040	5061	2	2	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0041	5061	2	0	2	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0042	5061	2	0	0	2	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0043	5061	2	0	0	2	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0044	5061	2	0	0	2	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0045	5061	2	0	0	0	0	2	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0046	5061	2	2	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0047	5061	2	0	0	0	0	2	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0048	5061	1	1	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0049	5061	1	1	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0050	5058	1	1	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0051	5061	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0052	5061	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0053	5061	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0054	5061	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0055	5061	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0056	5058	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	1/0	c0057	5061	1	0	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0058	5061	1	1	0	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0059	5061	1	0	0	0	1	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0060	5061	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0061	5061	1	0	0	0	0	1	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0062	5061	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0063	5061	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0064	5061	1	0	1	0	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0065	5061	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464
ADAMTS7_chr15_78754206_78816464	0/0	c0066	5061	1	0	0	1	0	0	copy fasta	ADAMTS7	chr15	78754206	78816464