JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
DACT2_chr6_168301904_168324777	0/0	c0007	2337	12	12	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0008	2325	7	0	0	7	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0009	2325	6	0	2	1	0	3	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0010	2325	6	5	1	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0011	2325	5	0	1	0	1	3	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0012	2325	4	0	4	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0013	2337	4	4	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0014	2337	3	3	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0015	2325	3	3	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0016	2325	2	0	0	2	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0017	2337	2	2	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0018	2325	2	0	0	2	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0019	2325	2	2	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0020	2325	1	0	0	1	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0021	2337	1	1	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0022	2325	1	1	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0023	2325	1	0	0	1	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0024	2325	1	1	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0025	2325	1	0	0	0	0	1	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0026	2325	1	0	0	1	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0027	2325	1	1	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0028	2294	1	0	0	1	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0029	2325	1	0	0	0	0	1	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0030	2325	1	1	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0031	2325	1	0	1	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0032	2325	1	0	0	1	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0033	2325	1	1	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0034	2337	1	1	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0035	2337	1	0	0	0	0	1	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0036	2325	1	0	0	1	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0037	2325	1	0	0	0	0	1	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0038	2325	1	0	0	1	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0039	2325	1	1	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0040	2337	1	1	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT2_chr6_168301904_168324777	0/0	c0041	2337	1	1	0	0	0	0	copy fasta	DACT2	chr6	168301904	168324777
DACT3_chr19_46642551_46666182	1/1	c0001	1890	428	87	77	206	13	43	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0002	1890	12	0	3	4	3	2	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0003	1890	3	2	1	0	0	0	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0004	1890	2	0	0	0	0	2	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0005	1890	1	1	0	0	0	0	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0006	1890	1	0	0	1	0	0	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0007	1890	1	0	0	1	0	0	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0008	1890	1	0	0	1	0	0	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0009	1890	1	1	0	0	0	0	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0010	1890	1	0	0	0	0	1	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0011	1890	1	0	0	1	0	0	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0012	1890	1	1	0	0	0	0	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0013	1890	1	1	0	0	0	0	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0014	1890	1	1	0	0	0	0	copy fasta	DACT3	chr19	46642551	46666182
DACT3_chr19_46642551_46666182	0/0	c0015	1890	1	0	1	0	0	0	copy fasta	DACT3	chr19	46642551	46666182