JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
DHX37_chr12_124941826_124994131	0/0	c0022	3474	3	0	1	0	2	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0023	3474	3	3	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/1	c0024	3474	2	0	1	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0025	3474	2	1	0	0	0	1	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0026	3474	2	0	0	2	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0027	3474	2	2	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0028	3474	2	0	0	2	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0029	3474	2	0	0	0	0	2	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0030	3474	2	2	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0031	3474	2	0	2	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0032	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0033	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0034	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0035	3474	1	0	1	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0036	3474	1	0	0	0	0	1	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0037	3474	1	0	1	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0038	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0039	3474	1	0	1	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0040	3474	1	0	1	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0041	3474	1	0	0	1	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0042	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0043	3474	1	0	0	1	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0044	3474	1	0	0	1	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0045	3474	1	0	0	1	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0046	3474	1	0	0	0	0	1	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0047	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0048	3474	1	0	0	1	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0049	3474	1	0	0	1	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0050	3474	1	0	1	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0051	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0052	3474	1	0	0	1	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0053	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0054	3474	1	0	0	0	0	1	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0055	3474	1	0	0	1	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0056	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0057	3474	1	0	0	1	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0058	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0059	3474	1	1	0	0	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX37_chr12_124941826_124994131	0/0	c0060	3474	1	0	0	1	0	0	copy fasta	DHX37	chr12	124941826	124994131
DHX38_chr16_72088847_72117912	1/0	c0001	3684	163	11	52	74	7	18	copy fasta	DHX38	chr16	72088847	72117912
DHX38_chr16_72088847_72117912	0/1	c0002	3684	142	48	15	61	3	14	copy fasta	DHX38	chr16	72088847	72117912
DHX38_chr16_72088847_72117912	0/0	c0003	3684	18	1	2	12	2	1	copy fasta	DHX38	chr16	72088847	72117912
DHX38_chr16_72088847_72117912	0/0	c0004	3684	17	17	0	0	0	0	copy fasta	DHX38	chr16	72088847	72117912
DHX38_chr16_72088847_72117912	0/0	c0005	3684	14	1	6	0	3	4	copy fasta	DHX38	chr16	72088847	72117912
DHX38_chr16_72088847_72117912	0/0	c0006	3684	4	0	0	4	0	0	copy fasta	DHX38	chr16	72088847	72117912
DHX38_chr16_72088847_72117912	0/0	c0007	3684	3	0	3	0	0	0	copy fasta	DHX38	chr16	72088847	72117912
DHX38_chr16_72088847_72117912	0/0	c0008	3684	3	0	0	0	0	3	copy fasta	DHX38	chr16	72088847	72117912
DHX38_chr16_72088847_72117912	0/0	c0009	3684	3	0	2	0	0	1	copy fasta	DHX38	chr16	72088847	72117912
DHX38_chr16_72088847_72117912	0/0	c0010	3684	2	2	0	0	0	0	copy fasta	DHX38	chr16	72088847	72117912
DHX38_chr16_72088847_72117912	0/0	c0011	3684	1	0	0	1	0	0	copy fasta	DHX38	chr16	72088847	72117912