Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
ADCY10_chr1_167804386_167919134	0/0	c0015	4833	4	0	1	3	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0016	4833	3	0	0	3	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0017	4833	3	0	2	0	1	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0018	4833	2	0	1	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0019	4833	2	2	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0020	4833	2	1	1	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0021	4833	2	1	1	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0022	4833	2	2	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0023	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0024	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0025	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0026	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0027	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0028	4833	1	0	0	0	0	1	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0029	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0030	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0031	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0032	4833	1	0	0	0	0	1	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/1	c0033	4833	1	0	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0034	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0035	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0036	4833	1	0	1	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0037	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0038	4833	1	0	1	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0039	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0040	4833	1	0	0	0	0	1	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0041	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0042	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0043	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0044	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0045	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0046	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0047	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0048	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0049	4833	1	0	0	0	1	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0050	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0051	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0052	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0053	4833	1	0	0	1	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0054	4833	1	0	0	0	1	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0055	4833	1	0	1	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0056	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0057	4833	1	0	0	0	1	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0058	4833	1	1	0	0	0	0	copy fasta	ADCY10	chr1	167804386	167919134
ADCY10_chr1_167804386_167919134	0/0	c0059	4833	1	0	0	0	0	1	copy fasta	ADCY10	chr1	167804386	167919134
ADCY1_chr7_45569368_45728116	1/0	c0001	3360	202	46	34	97	5	19	copy fasta	ADCY1	chr7	45569368	45728116
ADCY1_chr7_45569368_45728116	0/0	c0002	3360	51	21	9	15	3	3	copy fasta	ADCY1	chr7	45569368	45728116
ADCY1_chr7_45569368_45728116	0/0	c0003	3360	5	0	5	0	0	0	copy fasta	ADCY1	chr7	45569368	45728116
ADCY1_chr7_45569368_45728116	0/0	c0004	3372	3	0	0	3	0	0	copy fasta	ADCY1	chr7	45569368	45728116
ADCY1_chr7_45569368_45728116	0/0	c0005	3360	2	0	1	0	0	1	copy fasta	ADCY1	chr7	45569368	45728116