JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
DNAH8_chr6_38710311_39035792	0/0	c0051	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0052	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0053	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0054	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0055	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0056	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0057	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0058	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0059	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0060	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0061	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0062	14124	1	0	0	0	1	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0063	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0064	14124	1	0	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0065	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0066	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0067	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0068	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0069	14124	1	0	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0070	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0071	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0072	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0073	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0074	14124	1	0	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0075	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0076	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0077	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0078	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0079	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0080	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0081	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0082	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0083	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0084	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0085	14124	1	0	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0086	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0087	14124	1	0	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0088	14124	1	0	0	0	0	1	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0089	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0090	14124	1	0	0	1	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0091	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0092	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0093	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0094	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0095	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0096	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0097	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0098	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0099	14124	1	1	0	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792
DNAH8_chr6_38710311_39035792	0/0	c0100	14124	1	0	1	0	0	0	copy fasta	DNAH8	chr6	38710311	39035792