JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
DOCK2_chr5_169632275_170088382	0/0	c0047	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0048	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0049	5493	1	0	0	1	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0050	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0051	5493	1	0	1	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0052	5493	1	0	0	1	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0053	5493	1	0	0	1	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0054	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0055	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0056	5493	1	0	0	0	0	1	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0057	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0058	5493	1	0	1	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0059	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0060	5493	1	0	0	0	0	1	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0061	5493	1	0	0	1	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0062	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0063	5493	1	0	0	1	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0064	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0065	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0066	5493	1	0	0	0	0	1	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0067	5493	1	0	0	1	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0068	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0069	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0070	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0071	5493	1	0	0	1	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0072	5493	1	0	0	1	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0073	5493	1	0	0	1	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0074	5493	1	0	0	0	1	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0075	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0076	5493	1	0	0	0	1	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0077	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0078	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0079	5493	1	0	0	0	0	1	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0080	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0081	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0082	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0083	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0084	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK2_chr5_169632275_170088382	0/0	c0085	5493	1	1	0	0	0	0	copy fasta	DOCK2	chr5	169632275	170088382
DOCK3_chr3_50669927_51389198	1/1	c0001	6093	196	41	34	104	6	9	copy fasta	DOCK3	chr3	50669927	51389198
DOCK3_chr3_50669927_51389198	0/0	c0002	6093	4	0	4	0	0	0	copy fasta	DOCK3	chr3	50669927	51389198
DOCK3_chr3_50669927_51389198	0/0	c0003	6093	1	1	0	0	0	0	copy fasta	DOCK3	chr3	50669927	51389198
DOCK3_chr3_50669927_51389198	0/0	c0004	6093	1	0	0	1	0	0	copy fasta	DOCK3	chr3	50669927	51389198
DOCK3_chr3_50669927_51389198	0/0	c0005	6093	1	1	0	0	0	0	copy fasta	DOCK3	chr3	50669927	51389198
DOCK3_chr3_50669927_51389198	0/0	c0006	6093	1	1	0	0	0	0	copy fasta	DOCK3	chr3	50669927	51389198
DOCK3_chr3_50669927_51389198	0/0	c0007	6093	1	0	0	1	0	0	copy fasta	DOCK3	chr3	50669927	51389198
DOCK3_chr3_50669927_51389198	0/0	c0008	6093	1	0	0	0	0	1	copy fasta	DOCK3	chr3	50669927	51389198
DOCK3_chr3_50669927_51389198	0/0	c0009	6093	1	1	0	0	0	0	copy fasta	DOCK3	chr3	50669927	51389198
DOCK3_chr3_50669927_51389198	0/0	c0010	6093	1	1	0	0	0	0	copy fasta	DOCK3	chr3	50669927	51389198
DOCK3_chr3_50669927_51389198	0/0	c0011	6093	1	1	0	0	0	0	copy fasta	DOCK3	chr3	50669927	51389198