JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
DOCK8_chr9_209865_470255	0/0	c0086	6300	1	0	0	0	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0087	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0088	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0089	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0090	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0091	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0092	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0093	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0094	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0095	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0096	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0097	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0098	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0099	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0100	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0101	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0102	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0103	6300	1	0	0	0	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0104	6300	1	0	0	1	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	1/0	c0105	6300	1	0	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0106	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0107	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0108	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0109	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0110	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0111	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0112	6300	1	0	0	1	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0113	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0114	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0115	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0116	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0117	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0118	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0119	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0120	6300	1	0	0	0	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0121	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0122	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0123	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0124	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0125	6300	1	0	0	0	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0126	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0127	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0128	6300	1	0	1	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0129	6300	1	0	0	0	1	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0130	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0131	6300	1	0	0	1	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0132	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0133	6300	1	0	0	0	0	1	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0134	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255
DOCK8_chr9_209865_470255	0/0	c0135	6300	1	1	0	0	0	0	copy fasta	DOCK8	chr9	209865	470255