JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
FBN2_chr5_128252909_128543245	0/1	c0003	8739	20	4	5	8	0	2	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	1/0	c0004	8739	18	9	2	1	1	4	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0005	8739	14	1	1	11	1	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0006	8739	8	0	4	2	1	1	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0007	8739	6	4	2	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0008	8739	4	4	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0009	8739	4	3	0	0	0	1	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0010	8739	4	4	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0011	8739	3	3	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0012	8739	3	0	3	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0013	8739	3	0	3	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0014	8739	2	2	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0015	8739	2	2	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0016	8739	2	1	0	0	0	1	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0017	8739	2	0	0	2	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0018	8739	2	0	0	2	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0019	8739	2	0	0	2	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0020	8739	2	0	2	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0021	8739	2	0	0	0	1	1	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0022	8739	2	0	0	0	0	2	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0023	8739	2	2	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0024	8739	2	0	0	2	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0025	8739	2	2	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0026	8739	2	1	0	0	1	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0027	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0028	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0029	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0030	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0031	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0032	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0033	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0034	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0035	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0036	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0037	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0038	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0039	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0040	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0041	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0042	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0043	8739	1	0	1	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0044	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0045	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0046	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0047	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0048	8739	1	0	0	1	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0049	8739	1	0	0	1	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0050	8739	1	0	0	0	0	1	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0051	8739	1	0	0	1	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0052	8739	1	0	0	1	0	0	copy fasta	FBN2	chr5	128252909	128543245