JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
FBN2_chr5_128252909_128543245	0/0	c0053	8739	1	0	0	0	0	1	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0054	8739	1	0	0	1	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0055	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0056	8739	1	0	1	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0057	8739	1	0	0	0	0	1	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0058	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0059	8739	1	0	1	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0060	8739	1	0	0	1	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0061	8739	1	0	0	1	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0062	8739	1	0	1	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0063	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0064	8739	1	0	0	1	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0065	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0066	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0067	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0068	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0069	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN2_chr5_128252909_128543245	0/0	c0070	8739	1	1	0	0	0	0	copy fasta	FBN2	chr5	128252909	128543245
FBN3_chr19_8060402_8154592	0/0	c0001	8430	19	0	7	12	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0002	8430	14	0	4	4	0	6	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0003	8430	11	1	2	7	0	1	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0004	8430	10	0	1	9	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0005	8430	9	0	1	6	0	2	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0006	8430	9	0	5	0	1	3	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0007	8430	7	0	0	7	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0008	8430	6	0	1	3	1	1	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0009	8430	6	2	2	2	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/1	c0010	8430	5	0	4	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0011	8430	5	0	0	4	0	1	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0012	8430	5	0	2	3	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0013	8430	5	0	0	5	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0014	8430	4	0	2	0	0	2	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0015	8430	4	0	0	4	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0016	8430	4	0	1	3	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0017	8430	4	0	2	2	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0018	8430	4	2	0	0	2	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0019	8430	3	0	0	3	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0020	8430	3	3	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0021	8430	3	0	0	2	0	1	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0022	8430	3	3	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0023	8430	3	0	0	2	1	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0024	8430	3	0	3	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0025	8430	3	0	0	3	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0026	8430	3	0	1	2	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0027	8430	2	0	0	2	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0028	8430	2	0	0	0	2	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0029	8430	2	0	0	2	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0030	8430	2	0	0	0	0	2	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0031	8430	2	0	0	1	0	1	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0032	8430	2	0	0	2	0	0	copy fasta	FBN3	chr19	8060402	8154592