JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
FBN3_chr19_8060402_8154592	0/0	c0183	8430	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0184	8430	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0185	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0186	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0187	8430	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0188	8430	1	0	0	0	1	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0189	8430	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0190	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0191	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0192	8430	1	0	0	0	0	1	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0193	8430	1	0	0	0	0	1	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0194	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0195	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0196	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0197	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0198	8430	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0199	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0200	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0201	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0202	8430	1	0	0	0	0	1	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0203	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0204	8430	1	0	0	0	1	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0205	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0206	8430	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0207	8430	1	0	1	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0208	8430	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0209	8430	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0210	8430	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0211	8430	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0212	8430	1	1	0	0	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0213	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0214	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0215	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0216	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0217	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0218	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0219	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0220	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0221	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0222	8430	1	0	0	1	0	0	copy fasta	FBN3	chr19	8060402	8154592
FBN3_chr19_8060402_8154592	0/0	c0223	8430	1	0	0	0	0	1	copy fasta	FBN3	chr19	8060402	8154592
FBP1_chr9_94598133_94644518	0/1	c0001	1017	192	60	42	63	10	16	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	c0002	1017	100	6	15	56	4	19	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	c0003	1017	19	15	1	0	3	0	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	c0004	1017	14	1	2	6	0	5	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	c0005	1017	13	0	0	13	0	0	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	1/0	c0006	1017	7	1	2	0	1	2	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	c0007	1017	3	3	0	0	0	0	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	c0008	1017	1	0	0	1	0	0	copy fasta	FBP1	chr9	94598133	94644518
FBP1_chr9_94598133_94644518	0/0	c0009	1017	1	0	0	1	0	0	copy fasta	FBP1	chr9	94598133	94644518